Parental gene: | BGIOSGA014399 |
| Aliases: | None |
| Description: | None |
| Organism: | Rice subsp. indica (Oryza sativa indica) |
| Coordinates: | 4:29392347..29404011(-) |
>BGIOSGA014399
ATGGAGTCCGCGTCGTCTTCACTAGCGACCAGCGGGCGGCGCCGCAGCAGCAGCGGCGGCGGCGGCGGTAGCTGGGGCAG
CATCGGCTCCGCCGCCGACCCGTTCGACATCCCGGCTAAGGGTGCTCCCGTCGAGAGTCTCAAAAAATGGCGGCAAGCAG
CTCTAGTACTCAATGCATCCAGGCGCTTTAGATACACATTGGACTTGAAAAGGGAGGAACAAAGGGAGGAAGTTATAAGC
AAAATTCGTGCACAAGCTCACGTTGTCAGGGCTGCATTCCGCTTTAAAGAAGCAGGACAAGTCCACGTTCAGCAAAAGGA
GGTGGCAGCACCGCCAGTTGATGGTGCACTGGGCTTTGGTATCAAAGAAGACCAACTTACTGCATTGACCAGAGATCACA
ATTACTCTGCTCTACAACAGTATGGAGGGATTTCTGGGGTAGCGCGCATGCTAAAGACAGACACAGAGAAGGGGATTAGT
GGAGATGATTCAGATTTGACTGCAAGACGAAATGCATTTGGATCGAATACATACCCTCGTAAGAAAGGAAGAAGCTTCCT
GGCTTTCTTATGGGATGCTTGTAAAGATTTGACACTTATCATTCTCATGGTTGCTGCAGCAGTATCACTTGCTTTGGGCA
TAACAACAGAGGGGATAAAAGAAGGCTGGTATGATGGAGCAAGCATTGCTTTTGCTGTTCTCCTAGTTGTTGTTGTTACA
GCAACTAGCGATTACAAGCAATCCTTACAGTTTCAAAATCTTAATGAGGAAAAGCAGAACATCAAATTGGAGGTGGTTAG
AGGTGGAAGGCGAATCTCGGTATCCATTTATGATTTGGTTGCTGGTGATGTTGTGCCACTTAAAATTGGTGACCAGGTCC
CCGCTGATGGGATCCTTATCAGTGGTCACTCCCTGTCCGTAGATGAATCCAGCATGACCGGAGAGAGTAAAATTGTTCAC
AAAGATCAGAAATCACCATTCCTAATGTCTGGTTGTAAAGTTGCTGACGGGTATGGCACTATGCTGGTGACCGCAGTTGG
CATTAACACTGAATGGGGACTGCTAATGGCAAGCATTTCTGAAGATTCTGGTGAAGAAACACCTTTGCAGGTTCGCTTGA
ACGGTGTTGCCACCTTCATTGGAATGGTTGGACTTTCTGTTGCTCTCGCCGTTCTTGTTGTCCTTCTGGCCAGGTACTTC
ACTGGGCATACCTACAACCCTGATGGGTCAGTGCAATATGTGAAAGGAAAAATGGGTGTAGGCCAGACAATACGAGGAAT
AGTAGGAATATTTACAGTGGCGGTAACAATTGTTGTCGTGGCTGTTCCTGAAGGGTTACCATTGGCCGTCACGTTGACGC
TTGCCTTCTCTATGCGCAAGATGATGAGGGACAAAGCTCTGGTCAGGAGGCTCTCTGCATGTGAAACTATGGGTTCAGCC
ACAACAATTTGCAGCGACAAGACAGGAACGCTGACTTTGAATCAGATGACTGTTGTGGAGGCTTACTTTGGTGGAAAGAA
AATGGATCCTCCAGATAATGTTCAGGTGTTATCTGCTTCAATCTCATCATTGATTGTCGAAGGAATTGCTCAGAATACGT
CTGGAAGCATATTTGAGCCCGAGAATGGTCAAGATCCAGAGGTGACTGGATCACCGACCGAAAAGGCTATACTGTCTTGG
GGGCTGAAGCTTGGCATGAGATTCAATGACACAAGAACAAAGTCCTCTATTCTTCATGTTTTCCCATTCAACTCAGAGAA
AAAAAGAGGCGGGGTTGCAGTGCATCTGGGTGGCTCTGAGTCTGAGGTACACATACACTGGAAGGGAGCTGCAGAAATTA
TTTTGGATTCATGCAAAAGCTGGCTTGCTGCAGATGGTTCAAAGCATTCAATGACACCTGAGAAAATTAGTGAATTCAAG
AAATTCATAGAAGATATGGCTGCTTCGAGCCTCCGGTGTGTTGCCTTTGCTTATAGAACATATGAGATGGTTGATGTCCC
AAGTGAGGACCGGAGGGCTGATTGGATATTGCCTGAAGATGACTTGATTATGCTTGGCATAGTTGGGATAAAGGATCCTT
GCCGCCCGGGTGTTAAAGATTCTGTTCGGTTATGTGCAGCAGCTGGCATTAAGGTCCGCATGGTTACTGGAGACAACCTT
CAAACTGCCAGAGCCATTGCCTTGGAGTGTGGAATTTTATCTGATCCCAATGTGTCAGAGCCAGTCATTATTGAAGGAAA
GGCTTTTCGTGCACTGTCAGATTTAGAAAGGGAAGAAGCTGCAGAAAAGATTTCGGTGATGGGGAGGTCTTCACCAAATG
ACAAGCTTTTACTTGTTAAAGCATTAAGAAAAAGAGGTCATGTTGTTGCTGTGACTGGAGATGGCACAAATGATGCCCCA
GCTTTGCATGAGGCAGATATAGGTCTCTCCATGGGCATCCAGGGAACTGAAGTTGCCAAGGAGAGTTCTGATATTATCAT
CTTGGATGACAATTTTGCATCGGTCGTGAGGGTTGTCAGATGGGGTCGCTCAGTTTATGCAAACATTCAGAAATTTATAC
AGTTTCAGTTAACCGTCAACGTTGCAGCCTTGATTATTAACGTTGTTGCTGCTGTCAGTTCTGGGAATGTTCCCCTGAAC
GCTGTTCAGCTACTGTGGGTTAACCTAATCATGGATACTCTGGGTGCTCTTGCACTGGCGACAGAACCACCTACTGACCA
TCTTATGCAGAGACCACCAGTTGGCAGAAGGGAACCCTTGATAACAAATGTCATGTGGAGAAACTTAATCATAATGGCTC
TGTTTCAAGTTATAGTCCTCCTTACTCTCAACTTTAGGGGCACAAGCCTTTTGCAGCTAAAAAACGACAACCAGGCACAT
GCAGACAAAGTCAAAAATACCTTCATATTCAATACATTTGTTCTCTGTCAGGTGTTCAATGAATTCAATGCTAGGAAGCC
CGATGAGCTGAACATATTCAAGGGCATTACTGGGAACCATCTCTTTATGGCCATTGTTGCCATAACAGTTGTACTGCAGG
CGCTTATTGTTGAGTTCCTTGGCAAGTTTACATCGACAACCAGACTCACCTGGCAGTTGTGGTTGGTGTCAATAGGTCTC
GCCTTTTTTAGCTGGCCGTTGGCATTTGTGGGAAAGCTTATCCCTGTCCCAGAGAGACCATTAGGAGATTTCTTTGCATG
TTGCTGCCCAGGAAGTAAACAAGCTGCTGATGCCAAGGGTGATGACGCTGATCACAGCGATGTATGA
ATGGAGTCCGCGTCGTCTTCACTAGCGACCAGCGGGCGGCGCCGCAGCAGCAGCGGCGGCGGCGGCGGTAGCTGGGGCAG
CATCGGCTCCGCCGCCGACCCGTTCGACATCCCGGCTAAGGGTGCTCCCGTCGAGAGTCTCAAAAAATGGCGGCAAGCAG
CTCTAGTACTCAATGCATCCAGGCGCTTTAGATACACATTGGACTTGAAAAGGGAGGAACAAAGGGAGGAAGTTATAAGC
AAAATTCGTGCACAAGCTCACGTTGTCAGGGCTGCATTCCGCTTTAAAGAAGCAGGACAAGTCCACGTTCAGCAAAAGGA
GGTGGCAGCACCGCCAGTTGATGGTGCACTGGGCTTTGGTATCAAAGAAGACCAACTTACTGCATTGACCAGAGATCACA
ATTACTCTGCTCTACAACAGTATGGAGGGATTTCTGGGGTAGCGCGCATGCTAAAGACAGACACAGAGAAGGGGATTAGT
GGAGATGATTCAGATTTGACTGCAAGACGAAATGCATTTGGATCGAATACATACCCTCGTAAGAAAGGAAGAAGCTTCCT
GGCTTTCTTATGGGATGCTTGTAAAGATTTGACACTTATCATTCTCATGGTTGCTGCAGCAGTATCACTTGCTTTGGGCA
TAACAACAGAGGGGATAAAAGAAGGCTGGTATGATGGAGCAAGCATTGCTTTTGCTGTTCTCCTAGTTGTTGTTGTTACA
GCAACTAGCGATTACAAGCAATCCTTACAGTTTCAAAATCTTAATGAGGAAAAGCAGAACATCAAATTGGAGGTGGTTAG
AGGTGGAAGGCGAATCTCGGTATCCATTTATGATTTGGTTGCTGGTGATGTTGTGCCACTTAAAATTGGTGACCAGGTCC
CCGCTGATGGGATCCTTATCAGTGGTCACTCCCTGTCCGTAGATGAATCCAGCATGACCGGAGAGAGTAAAATTGTTCAC
AAAGATCAGAAATCACCATTCCTAATGTCTGGTTGTAAAGTTGCTGACGGGTATGGCACTATGCTGGTGACCGCAGTTGG
CATTAACACTGAATGGGGACTGCTAATGGCAAGCATTTCTGAAGATTCTGGTGAAGAAACACCTTTGCAGGTTCGCTTGA
ACGGTGTTGCCACCTTCATTGGAATGGTTGGACTTTCTGTTGCTCTCGCCGTTCTTGTTGTCCTTCTGGCCAGGTACTTC
ACTGGGCATACCTACAACCCTGATGGGTCAGTGCAATATGTGAAAGGAAAAATGGGTGTAGGCCAGACAATACGAGGAAT
AGTAGGAATATTTACAGTGGCGGTAACAATTGTTGTCGTGGCTGTTCCTGAAGGGTTACCATTGGCCGTCACGTTGACGC
TTGCCTTCTCTATGCGCAAGATGATGAGGGACAAAGCTCTGGTCAGGAGGCTCTCTGCATGTGAAACTATGGGTTCAGCC
ACAACAATTTGCAGCGACAAGACAGGAACGCTGACTTTGAATCAGATGACTGTTGTGGAGGCTTACTTTGGTGGAAAGAA
AATGGATCCTCCAGATAATGTTCAGGTGTTATCTGCTTCAATCTCATCATTGATTGTCGAAGGAATTGCTCAGAATACGT
CTGGAAGCATATTTGAGCCCGAGAATGGTCAAGATCCAGAGGTGACTGGATCACCGACCGAAAAGGCTATACTGTCTTGG
GGGCTGAAGCTTGGCATGAGATTCAATGACACAAGAACAAAGTCCTCTATTCTTCATGTTTTCCCATTCAACTCAGAGAA
AAAAAGAGGCGGGGTTGCAGTGCATCTGGGTGGCTCTGAGTCTGAGGTACACATACACTGGAAGGGAGCTGCAGAAATTA
TTTTGGATTCATGCAAAAGCTGGCTTGCTGCAGATGGTTCAAAGCATTCAATGACACCTGAGAAAATTAGTGAATTCAAG
AAATTCATAGAAGATATGGCTGCTTCGAGCCTCCGGTGTGTTGCCTTTGCTTATAGAACATATGAGATGGTTGATGTCCC
AAGTGAGGACCGGAGGGCTGATTGGATATTGCCTGAAGATGACTTGATTATGCTTGGCATAGTTGGGATAAAGGATCCTT
GCCGCCCGGGTGTTAAAGATTCTGTTCGGTTATGTGCAGCAGCTGGCATTAAGGTCCGCATGGTTACTGGAGACAACCTT
CAAACTGCCAGAGCCATTGCCTTGGAGTGTGGAATTTTATCTGATCCCAATGTGTCAGAGCCAGTCATTATTGAAGGAAA
GGCTTTTCGTGCACTGTCAGATTTAGAAAGGGAAGAAGCTGCAGAAAAGATTTCGGTGATGGGGAGGTCTTCACCAAATG
ACAAGCTTTTACTTGTTAAAGCATTAAGAAAAAGAGGTCATGTTGTTGCTGTGACTGGAGATGGCACAAATGATGCCCCA
GCTTTGCATGAGGCAGATATAGGTCTCTCCATGGGCATCCAGGGAACTGAAGTTGCCAAGGAGAGTTCTGATATTATCAT
CTTGGATGACAATTTTGCATCGGTCGTGAGGGTTGTCAGATGGGGTCGCTCAGTTTATGCAAACATTCAGAAATTTATAC
AGTTTCAGTTAACCGTCAACGTTGCAGCCTTGATTATTAACGTTGTTGCTGCTGTCAGTTCTGGGAATGTTCCCCTGAAC
GCTGTTCAGCTACTGTGGGTTAACCTAATCATGGATACTCTGGGTGCTCTTGCACTGGCGACAGAACCACCTACTGACCA
TCTTATGCAGAGACCACCAGTTGGCAGAAGGGAACCCTTGATAACAAATGTCATGTGGAGAAACTTAATCATAATGGCTC
TGTTTCAAGTTATAGTCCTCCTTACTCTCAACTTTAGGGGCACAAGCCTTTTGCAGCTAAAAAACGACAACCAGGCACAT
GCAGACAAAGTCAAAAATACCTTCATATTCAATACATTTGTTCTCTGTCAGGTGTTCAATGAATTCAATGCTAGGAAGCC
CGATGAGCTGAACATATTCAAGGGCATTACTGGGAACCATCTCTTTATGGCCATTGTTGCCATAACAGTTGTACTGCAGG
CGCTTATTGTTGAGTTCCTTGGCAAGTTTACATCGACAACCAGACTCACCTGGCAGTTGTGGTTGGTGTCAATAGGTCTC
GCCTTTTTTAGCTGGCCGTTGGCATTTGTGGGAAAGCTTATCCCTGTCCCAGAGAGACCATTAGGAGATTTCTTTGCATG
TTGCTGCCCAGGAAGTAAACAAGCTGCTGATGCCAAGGGTGATGACGCTGATCACAGCGATGTATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Medicago truncatula | MTR_4g008170 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oind_27 | 56.54 | 62.96 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all BGIOSGA014399 retrocopies