Parental gene: | Bra005691 |
| Aliases: | None |
| Description: | AT5G01290 (E=0.0) | mRNA guanylyltransferase/ phosphatase/ polynucleotide 5'-phosphatase/ protein tyrosine phosphatase/ protein tyrosine/serine/threonine phosphatase |
| Organism: | Chinese cabbage (Brassica rapa) |
| Coordinates: | A03:143080..146482(-) |
>Bra005691
ATGGACCTAAATGCTTCACCGGAGCCCGAGGAAGAGGAGGATCCTTTTCTTAAGAGACGCCTTGAACCCCGAGCAGAGTC
TGCTGTTGAGATCGCTAGACGGGAGCGTGAAGAAAGAACCAAAAGGATGAGACTTGACAGGCCTTCCCGAAACTCTCACC
ATGATCACCACCAGTTTCACCACAACAACAATAGTGATACTAGAGTCTATGATAAAAGCAAGATCCCTCAAGGTTGGCTG
GATTGTCCTGGTTTTGGTCTGGAGATAGGATGCATCATTCCTTCTAAGGTTCCCCTTAGCGAATCTTACAACGAACATGT
TCCTCCTGGCAAAAGATACTCTTTTAAACAAGTCGTCCGCAACCAGAGAATCAGTGGACGAAAACTTGGTCTAGTGATTG
ATCTAACTAATACAACTCGTTACTATTCCACACTTGACTTAAAGAAGGATGGCATCAAGCATGTTAAGATTGCTTGCAGG
GGTCGTGATGCGGTTCCGGATAACGTCTCTGTAAACTCCTTCGTCAACGAGGCTATTCAGTTCATCGTTAATCAAAAACA
CCCAAAGAAGTATATCCTCGTCCACTGTACTCATGGGCATAATCGGACAGGGTTCATGATAGTTCATTATCTTATGCGCT
CTATGCCCACCATGAACGTTACACAGGCGTTGAAAATGTTTTCTGATGCCCGCCCACCTGGGATTTATAAACCGGATTAT
ATTGATGCTTTATACACTTTTTATCACGAAATAAAGCCTGAGACTGCTACTTGCCCACCAACTCCTGAATGGAAGAGGTC
TACCGAGCTTGATCTTAATGGTGATGCAGTTCATCAAGATGACGGTGATGGTGATGATGATGATGATGCTCAGCCTGGCC
CTGTCCAAGAAATCAGTCAGGAGATTGTGACGATGTCAAATGATGACATATTGGGTGATGAAATACCCTATTATCAAGAA
GAAGCTTACCGAAAATTCTGTTATAAGATGCTTATGATGAGTATTGGGGGAAGAGGATGTGCACAATTCCCAGGGTCACA
CCCTGTATCCTTAGACAGGGAGAGTTTACAACTTTTGAGACAGCGCTACTATTATGCGACATGGAAAGCAGATGGAACAC
GTTATATGATGCTCTTAACCATAGATGGTTGCTATCTGATAGATAGGAGCTTTAAGTTTCGAAGGGTACAGATGCGTTTC
CCCTGTAGGCACTCAAGTGGAGGAATACCTGATCAAGTACATCATTTCACTTTGCTTGATGGAGAAATGGTTATAGATAA
TCCGATGAATGAAAAAGGGCAGGCGAGGAGGAGGTACCTCGTATATGACTTGGTAGCAATCAACGGTGAATCAGTCGTAG
AGCGGACATTCTGTGAAAGATGGAACATGGTAGTGCACGAGGTGATCAAAGGCCGTGATGTTGATAAGCAAAGGAATCAT
TGCTACAGATATGACCTGGAGCCTTTTGGTGTACGGATGAAGGGTTTTTATTTGCTCTCGACAGTTGAGAAGCTTTTGAA
GGGTACCATTCCGTCACTTTCGCATGAAGCAGATGGCCTTATATTTCAGGGCTGGGACGATCCTTACGTTCCCCGAACGC
ATAAAGGTCTGCTGAAGTGGAAGTATGCGGAAATGAACTCGGTAGACTTTCTGTTCGAGATGGGCGAGGAGGATGAAGGT
CGCAGGATGCTCTTCTTGTTTGAAAGAGGGAAGAAAAAGCTTATGGACGGATATACGGTTGAGTTCAGAGATGGTTCGGA
TCCGTCAAGCTACAATGGGAAGATTGTAGAGTGTTCATGGGATAAGGAGAAGAAAGTATGGGTTAGCATGCGTATCAGAG
TCGACAAAACTACACCAAACGATATCAACACCGCTCGTAAGGTGATTAAAAGCATAAACGACAACATCACAGAGGAAGTG
TTGCTTCAAGAGATAAGAGAGATCATCCGTCTCCCAATGTACGCTGACCGCATTCGAATGGACCTTCGAGCAGCTGGACG
TTGA
ATGGACCTAAATGCTTCACCGGAGCCCGAGGAAGAGGAGGATCCTTTTCTTAAGAGACGCCTTGAACCCCGAGCAGAGTC
TGCTGTTGAGATCGCTAGACGGGAGCGTGAAGAAAGAACCAAAAGGATGAGACTTGACAGGCCTTCCCGAAACTCTCACC
ATGATCACCACCAGTTTCACCACAACAACAATAGTGATACTAGAGTCTATGATAAAAGCAAGATCCCTCAAGGTTGGCTG
GATTGTCCTGGTTTTGGTCTGGAGATAGGATGCATCATTCCTTCTAAGGTTCCCCTTAGCGAATCTTACAACGAACATGT
TCCTCCTGGCAAAAGATACTCTTTTAAACAAGTCGTCCGCAACCAGAGAATCAGTGGACGAAAACTTGGTCTAGTGATTG
ATCTAACTAATACAACTCGTTACTATTCCACACTTGACTTAAAGAAGGATGGCATCAAGCATGTTAAGATTGCTTGCAGG
GGTCGTGATGCGGTTCCGGATAACGTCTCTGTAAACTCCTTCGTCAACGAGGCTATTCAGTTCATCGTTAATCAAAAACA
CCCAAAGAAGTATATCCTCGTCCACTGTACTCATGGGCATAATCGGACAGGGTTCATGATAGTTCATTATCTTATGCGCT
CTATGCCCACCATGAACGTTACACAGGCGTTGAAAATGTTTTCTGATGCCCGCCCACCTGGGATTTATAAACCGGATTAT
ATTGATGCTTTATACACTTTTTATCACGAAATAAAGCCTGAGACTGCTACTTGCCCACCAACTCCTGAATGGAAGAGGTC
TACCGAGCTTGATCTTAATGGTGATGCAGTTCATCAAGATGACGGTGATGGTGATGATGATGATGATGCTCAGCCTGGCC
CTGTCCAAGAAATCAGTCAGGAGATTGTGACGATGTCAAATGATGACATATTGGGTGATGAAATACCCTATTATCAAGAA
GAAGCTTACCGAAAATTCTGTTATAAGATGCTTATGATGAGTATTGGGGGAAGAGGATGTGCACAATTCCCAGGGTCACA
CCCTGTATCCTTAGACAGGGAGAGTTTACAACTTTTGAGACAGCGCTACTATTATGCGACATGGAAAGCAGATGGAACAC
GTTATATGATGCTCTTAACCATAGATGGTTGCTATCTGATAGATAGGAGCTTTAAGTTTCGAAGGGTACAGATGCGTTTC
CCCTGTAGGCACTCAAGTGGAGGAATACCTGATCAAGTACATCATTTCACTTTGCTTGATGGAGAAATGGTTATAGATAA
TCCGATGAATGAAAAAGGGCAGGCGAGGAGGAGGTACCTCGTATATGACTTGGTAGCAATCAACGGTGAATCAGTCGTAG
AGCGGACATTCTGTGAAAGATGGAACATGGTAGTGCACGAGGTGATCAAAGGCCGTGATGTTGATAAGCAAAGGAATCAT
TGCTACAGATATGACCTGGAGCCTTTTGGTGTACGGATGAAGGGTTTTTATTTGCTCTCGACAGTTGAGAAGCTTTTGAA
GGGTACCATTCCGTCACTTTCGCATGAAGCAGATGGCCTTATATTTCAGGGCTGGGACGATCCTTACGTTCCCCGAACGC
ATAAAGGTCTGCTGAAGTGGAAGTATGCGGAAATGAACTCGGTAGACTTTCTGTTCGAGATGGGCGAGGAGGATGAAGGT
CGCAGGATGCTCTTCTTGTTTGAAAGAGGGAAGAAAAAGCTTATGGACGGATATACGGTTGAGTTCAGAGATGGTTCGGA
TCCGTCAAGCTACAATGGGAAGATTGTAGAGTGTTCATGGGATAAGGAGAAGAAAGTATGGGTTAGCATGCGTATCAGAG
TCGACAAAACTACACCAAACGATATCAACACCGCTCGTAAGGTGATTAAAAGCATAAACGACAACATCACAGAGGAAGTG
TTGCTTCAAGAGATAAGAGAGATCATCCGTCTCCCAATGTACGCTGACCGCATTCGAATGGACCTTCGAGCAGCTGGACG
TTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brassica oleracea | Bo3g001500 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_brap_27 | 61.56 | 54.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Bra005691 retrocopies