Parental gene: | Bra028896 |
| Aliases: | None |
| Description: | AT5G01320 (E=0.0) | pyruvate decarboxylase, putative |
| Organism: | Chinese cabbage (Brassica rapa) |
| Coordinates: | A02:1529385..1531464(+) |
>Bra028896
ATGGACACCAAAATCGGATCCATCGACGCGTGCAAGCCCACCAATGGCGACGTCGGTAGTCCACCAAGCGGCGCCGTCGC
AACCATCCATGACTCTGCTCCCTCCTCCGCTCTCTCCGTCGGCTCCTCCGAAGCGACTCTCGGGCGTCACTTGGCCCGAC
GTCTTGTCCAGGCTGGAGTCACCGACATCTTCTCTGTCCCCGGCGATTTCAACCTAACTTTGCTGGACCACCTCATCGCC
GAGCCGGAGCTCAAGAACATCGGCTGCTGCAACGAGCTGAACGCCGGCTACGCTGCCGACGGTTACGCTCGATCTCGCGG
AGTGGGCGCTTGCGTCGTGACCTTCACGGTAGGTGGACTTAGCGTTTTGAACGCGATCGCTGGTGCGTACAGTGAGAATC
TGCCGGTTATATGTATCGTTGGAGGTCCTAACTCCAACGATTTTGGCACTAACCGTATTCTCCATCACACCATCGGTTTA
CCTGATTTTAGCCAAGAGCTTAGGTGTTTCCAGACCGTTACTTGCCACCAGGCGGTGGTGAACAACTTGGAAGATGCACA
TGAACAAATAGACAAGGCCATTTCAACAGCTCTTAAAGAGAGCAAGCCTGTTTACATCAGCATCAGCTGCAACTTAGCTG
CTACTCCTCATCCAACTTTCATCCGTGATCCTGTTCCCTTCTCCCTTACTCCAAGATTGAGCAATAAGATGGGCCTTGAA
GCTGCGGTTGAAGCAACTTTGGAGTTTCTCAACAAGGCCGTGAAGCCGGTCATGGTTGGTGGTGTCAAGCTACGTGTAGC
CAAAGCCAGCGATGCTTTTGTCGACCTTGCAGACGCTTCTGGCTACGCCATGGCGGTGATGCCATCTGCAAAGGGCCTAG
TCCCGGAGCACCATCCTCACTTCATTGGGACTTACTGGGGAGCAGTGAGCACTCCTTTCTGCTCCGAGATTGTGGAATCC
GCAGATGCCTACATCTTCGCGGGCCCAATCTTCAACGACTACAGCTCTGTGGGTTACTCTCTTCTCCTCAAGAAAGAGAA
AGCCATCGTTGTGCATCCTGACCGTGTCACTATTGCCAATGGTCAAACCTTTGGGTGCGTTCTCATGAGCGATTTCTTCA
CTGAGTTGGCTAAGAGGGTGAAGCGTAACGAGACGGCTTATGAGAACTACCACAGGATCTTTGTCCCTGAAGGCAAGCCA
TTGACATGCAAACCAAAAGAGCCTTTGAGAGTCAACGCAATGTTCCAACACATTCAGAAGATGATCTCTAGTGAAACCGC
TGTCATTGCTGAAACCGGTGATTCTTGGTTTAACTGCCAGAAACTAAAGCTGCCTAAAGGATGTGGGTACGAGTTTCAGA
TGCAGTATGGATCCATCGGGTGGTCTGTAGGTGCGACTCTGGGATACGCACAAGCTGTACCAGAGAAGCGAGTGTTGGCT
TTCATCGGTGATGGAAGTTTCCAAGTGACGGCTCAGGACGTATCCACGATGCTGCGTAACGGTCAGAAAACAATCATATT
CCTCATTAACAACGGTGGCTACACCATTGAAGTGGAGATTCATGACGGTCCATATAACGTGATCAAGAACTGGAACTACA
CTGGTCTCGTCGATGCCATTCATAACGGGGAAGGAAAATGCTGGACCGCAAAGGTGAGATACGAGGAAGAGCTGGTTGAG
GCGATCAAGACAGCTACAACGGAGAAGAAGGATAGTCTTTGTTTCATTGAAGTGATAGTTCACAAAGATGATACGAGCAA
AGAGTTGCTTGAGTGGGGCTCACGCGTCGCTGCTGCTAATGGTCGTCCCCCAAACCCTCAGTAA
ATGGACACCAAAATCGGATCCATCGACGCGTGCAAGCCCACCAATGGCGACGTCGGTAGTCCACCAAGCGGCGCCGTCGC
AACCATCCATGACTCTGCTCCCTCCTCCGCTCTCTCCGTCGGCTCCTCCGAAGCGACTCTCGGGCGTCACTTGGCCCGAC
GTCTTGTCCAGGCTGGAGTCACCGACATCTTCTCTGTCCCCGGCGATTTCAACCTAACTTTGCTGGACCACCTCATCGCC
GAGCCGGAGCTCAAGAACATCGGCTGCTGCAACGAGCTGAACGCCGGCTACGCTGCCGACGGTTACGCTCGATCTCGCGG
AGTGGGCGCTTGCGTCGTGACCTTCACGGTAGGTGGACTTAGCGTTTTGAACGCGATCGCTGGTGCGTACAGTGAGAATC
TGCCGGTTATATGTATCGTTGGAGGTCCTAACTCCAACGATTTTGGCACTAACCGTATTCTCCATCACACCATCGGTTTA
CCTGATTTTAGCCAAGAGCTTAGGTGTTTCCAGACCGTTACTTGCCACCAGGCGGTGGTGAACAACTTGGAAGATGCACA
TGAACAAATAGACAAGGCCATTTCAACAGCTCTTAAAGAGAGCAAGCCTGTTTACATCAGCATCAGCTGCAACTTAGCTG
CTACTCCTCATCCAACTTTCATCCGTGATCCTGTTCCCTTCTCCCTTACTCCAAGATTGAGCAATAAGATGGGCCTTGAA
GCTGCGGTTGAAGCAACTTTGGAGTTTCTCAACAAGGCCGTGAAGCCGGTCATGGTTGGTGGTGTCAAGCTACGTGTAGC
CAAAGCCAGCGATGCTTTTGTCGACCTTGCAGACGCTTCTGGCTACGCCATGGCGGTGATGCCATCTGCAAAGGGCCTAG
TCCCGGAGCACCATCCTCACTTCATTGGGACTTACTGGGGAGCAGTGAGCACTCCTTTCTGCTCCGAGATTGTGGAATCC
GCAGATGCCTACATCTTCGCGGGCCCAATCTTCAACGACTACAGCTCTGTGGGTTACTCTCTTCTCCTCAAGAAAGAGAA
AGCCATCGTTGTGCATCCTGACCGTGTCACTATTGCCAATGGTCAAACCTTTGGGTGCGTTCTCATGAGCGATTTCTTCA
CTGAGTTGGCTAAGAGGGTGAAGCGTAACGAGACGGCTTATGAGAACTACCACAGGATCTTTGTCCCTGAAGGCAAGCCA
TTGACATGCAAACCAAAAGAGCCTTTGAGAGTCAACGCAATGTTCCAACACATTCAGAAGATGATCTCTAGTGAAACCGC
TGTCATTGCTGAAACCGGTGATTCTTGGTTTAACTGCCAGAAACTAAAGCTGCCTAAAGGATGTGGGTACGAGTTTCAGA
TGCAGTATGGATCCATCGGGTGGTCTGTAGGTGCGACTCTGGGATACGCACAAGCTGTACCAGAGAAGCGAGTGTTGGCT
TTCATCGGTGATGGAAGTTTCCAAGTGACGGCTCAGGACGTATCCACGATGCTGCGTAACGGTCAGAAAACAATCATATT
CCTCATTAACAACGGTGGCTACACCATTGAAGTGGAGATTCATGACGGTCCATATAACGTGATCAAGAACTGGAACTACA
CTGGTCTCGTCGATGCCATTCATAACGGGGAAGGAAAATGCTGGACCGCAAAGGTGAGATACGAGGAAGAGCTGGTTGAG
GCGATCAAGACAGCTACAACGGAGAAGAAGGATAGTCTTTGTTTCATTGAAGTGATAGTTCACAAAGATGATACGAGCAA
AGAGTTGCTTGAGTGGGGCTCACGCGTCGCTGCTGCTAATGGTCGTCCCCCAAACCCTCAGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Arabidopsis thaliana | AT4G33070 | ortholog_one2many | 1 retrogene | |
| Brassica oleracea | Bo2g001320 | ortholog_one2one | 1 retrogene | |
| Arabidopsis lyrata | fgenesh2_kg.7__814__AT4G33070.1 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_brap_2 | 82.70 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Bra028896 retrocopies