Parental gene: | NCSTN, ENSACAG00000016223 |
| Aliases: | None |
| Description: | None |
| Organism: | Anole lizard (Anolis carolinensis) |
| Coordinates: | GL343878.1:117464..128163(-) |
>ENSACAG00000016223
AGAGCGGCCCGAAAGAGCGGAAGCGGAAGCAAGAGAGGGCAGAAGTGTCTTCTTATTGAATTTGTCTCTTTCTTTCTTTC
AATAGGGTCCGTCCGGTGTAATTCTGTGGAGAGGAAGATCTACATCCCCTTGAACCGGACGGCAACCTGCGTCCGCCTCT
TAAATGCCACCCATCAAATAGGCTGCCAGTCTTCCTTGAATGGTGACACCGGCATCATCCATGTGGTGGAAGATGAGGAG
GTGGACTTGAAATGGGTCTTGGAGGAAGGTCCGCACGCCCCGTATGTGCTGCTCCTGGACGGAGAGCTCTTCACCGGGGA
ACTGATGCAGAGGCTGAAAGGCAGCTCCAGGATCTCCGGCCTGGCCGTGGCCATCGCCAAGCCCAGCCCTTCCAGGGGCT
TCTCCCCCGGGTTAAAGTGCCCCAACGACGGCTTCGGGGTGTACAACGGCAGCTACGGCCCGGAGTTTGCGCACTGCAAC
GTTACTGCCTGGAACCTCCTTGGCAACGGCCTCTCCTACCAGGACTTTGGCTTCCCCATCTTCCTCCTTCAAGACCAAAA
TGAAACAGAGGTCATCAAACAGTGCTTCCAGACCTACAACCGGCCACGGGGAGGCTCGGCCCCGCAGTATCCGCTGTGCG
CCATGCAGCTCTCCTCCCACATGCACGCCGTCACCAGCACGGTCACCTGTATGCGCCGCAGCGCCATCCAGAGCACCTTC
AGCCTCAACCCAGAGGTTGTCTGCGACCCTCTCACCGATTTCAATGTCTGGAGTGCGGTGAAGCCCATCAACGAGTCAGA
TAAGCCACCGCCCGACAGCATCGTCATGGCCGCTGCACGAATCGACAGCCACTCCTTCTTTTGGAACGTGGCCCCGGGGG
CAGAGAGCGCGGTGGGCTCCTTCGTGACCCTTCTGGCCGCGGCCGAAGCCATTCACAAGGCCCCCCGAGCACAGGCCCTG
CCCAGGAACATCCTCTTTGCCTTCTTCCAAGGGGTAAGTCCTATAATATCTTCTTCATCATAA
AGAGCGGCCCGAAAGAGCGGAAGCGGAAGCAAGAGAGGGCAGAAGTGTCTTCTTATTGAATTTGTCTCTTTCTTTCTTTC
AATAGGGTCCGTCCGGTGTAATTCTGTGGAGAGGAAGATCTACATCCCCTTGAACCGGACGGCAACCTGCGTCCGCCTCT
TAAATGCCACCCATCAAATAGGCTGCCAGTCTTCCTTGAATGGTGACACCGGCATCATCCATGTGGTGGAAGATGAGGAG
GTGGACTTGAAATGGGTCTTGGAGGAAGGTCCGCACGCCCCGTATGTGCTGCTCCTGGACGGAGAGCTCTTCACCGGGGA
ACTGATGCAGAGGCTGAAAGGCAGCTCCAGGATCTCCGGCCTGGCCGTGGCCATCGCCAAGCCCAGCCCTTCCAGGGGCT
TCTCCCCCGGGTTAAAGTGCCCCAACGACGGCTTCGGGGTGTACAACGGCAGCTACGGCCCGGAGTTTGCGCACTGCAAC
GTTACTGCCTGGAACCTCCTTGGCAACGGCCTCTCCTACCAGGACTTTGGCTTCCCCATCTTCCTCCTTCAAGACCAAAA
TGAAACAGAGGTCATCAAACAGTGCTTCCAGACCTACAACCGGCCACGGGGAGGCTCGGCCCCGCAGTATCCGCTGTGCG
CCATGCAGCTCTCCTCCCACATGCACGCCGTCACCAGCACGGTCACCTGTATGCGCCGCAGCGCCATCCAGAGCACCTTC
AGCCTCAACCCAGAGGTTGTCTGCGACCCTCTCACCGATTTCAATGTCTGGAGTGCGGTGAAGCCCATCAACGAGTCAGA
TAAGCCACCGCCCGACAGCATCGTCATGGCCGCTGCACGAATCGACAGCCACTCCTTCTTTTGGAACGTGGCCCCGGGGG
CAGAGAGCGCGGTGGGCTCCTTCGTGACCCTTCTGGCCGCGGCCGAAGCCATTCACAAGGCCCCCCGAGCACAGGCCCTG
CCCAGGAACATCCTCTTTGCCTTCTTCCAAGGGGTAAGTCCTATAATATCTTCTTCATCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP009831_adrenal | 4 .40 RPM |
| SRP009831_brain | 11 .41 RPM |
| SRP009831_dewlap | 21 .64 RPM |
| SRP009831_embryo | 17 .58 RPM |
| SRP009831_heart | 18 .06 RPM |
| SRP009831_liver | 9 .86 RPM |
| SRP009831_lung | 13 .65 RPM |
| SRP009831_ovary | 28 .65 RPM |
| SRP009831_skeletal_muscle | 5 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000022172 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_acar_159 | 77.19 | 50.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSACAG00000016223 retrocopies