Parental gene: | SMAGP, ENSBTAG00000001983 |
| Aliases: | None |
| Description: | Small cell adhesion glycoprotein [Source:UniProtKB/Swiss-Prot;Acc:A4IFL2] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 5:28683697..28709507(+) |
>ENSBTAG00000001983
ATGACTAGCTTTCCAACCACGCCTCCTCCAGCAGAAGAACTGATGGCTACCACAATTCTACAGGCCACTGAGGCCCTGTC
TCCGGAAGCTGAAGCCAGCACAGCTCTCATTGCAGTTGTTATCACCGTGGTCTTCCTCACCCTGCTCTCAGTCGTGATTT
TGATCTTCTTTTACCTGTACAAGAACAAAGGCAGCTACGTCACCTACGAACCCGCAGATGGCGAGCCTGGCGCCGTTGTC
CTGATGGAGAATGACTCAGCCAAGGGCAGAGAAAAGGAAGAATATTTCATCTAA
ATGACTAGCTTTCCAACCACGCCTCCTCCAGCAGAAGAACTGATGGCTACCACAATTCTACAGGCCACTGAGGCCCTGTC
TCCGGAAGCTGAAGCCAGCACAGCTCTCATTGCAGTTGTTATCACCGTGGTCTTCCTCACCCTGCTCTCAGTCGTGATTT
TGATCTTCTTTTACCTGTACAAGAACAAAGGCAGCTACGTCACCTACGAACCCGCAGATGGCGAGCCTGGCGCCGTTGTC
CTGATGGAGAATGACTCAGCCAAGGGCAGAGAAAAGGAAGAATATTTCATCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 3 .84 RPM |
| SRP017611_kidney | 18 .49 RPM |
| SRP017611_liver | 0 .68 RPM |
| ERP005899_muscle | 7 .44 RPM |
| ERP005899_liver | 0 .65 RPM |
| SRP030211_testis | 18 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000017680 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000024893 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000053559 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1742 | 81.44 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000001983 retrocopies