Parental gene: | SKA3, ENSBTAG00000003314 |
| Aliases: | SKA3, C12H13ORF3 |
| Description: | Spindle and kinetochore-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:A8PUI7] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 12:35841562..35854986(+) |
>ENSBTAG00000003314
ATGGATCCGATCCGAGGCTTTTGCGGGAAGCTGCGGTCTCTGGCCGTCACCTTGGACAGCGAGACGGCCCGGCTGCAGCG
AGCGCTGGACGGAGAGGACAGCGACTTTGAAGACTGTCCAATGAGAGTTCTACATGACCTTAACTCAGAAGTACGAATTC
TAAAGGATGATGTCAATATTCTTCTTGATAAAGCAAACTTGGAAAGTCAAGAAAACATTGGTTTCATAAAAGCAACAAAA
ATATTGATGAGAAAGAATTCAATGGATATCATGAAAATAAAAGAGTTCTTCCAGAAGTATGGATATACTCCACGTGCCAA
GAAAAATTCAGTGGATGAGCAAGAAGTCACTGACTCTAAACCAGAGTCCAGTGAATGTGAACGTCCTGAGAAGCCTGACT
TGAAAGATGATTTGTTGGATTCTGCTGCTGCAAGCACTTCTGTTTCTGAGAAGTCACCGCGTAGTCCACAGCTTTCTGAT
TTTGGACTTGAGCGGTACATCGTATCCCAAGTTCTACCAAACCCTCCCCAAGCAGTAAACAACCAGAAGGAAGAGCCAAA
AATTTTAACTCCATTTTCCAAACACTCACTACTAAAAACTCCAAAATGTGCACTAAAGATGGATGATTTTGAGTGTGTAA
CTCCTAAATTAGAACACTTTGGTATCTCTGAATATACTATGTGTTTAAATGACGATTACACAATTGGACTTAAAAATGTG
AAAACTAACAGTGAGACCATAGAAACAGAACCAGTGCCCAATGATAATGTCTTTGCCACTCCTGGCCTCATAACCCAGCC
ATTGGGAAAAAACAATGCTGAGCATACACATTCTCCCTTGGCACCTACATTCTGCACTCCTGGTTTGAAAGTCCCTTCTA
CAAAGACCAGCACAGCTATGGTATCCACAAACAGTTCATCAAATGACTTAGAAACAAAAGAAAGTACATCATTAGTTTCA
AATTCAGACGAGTGCTTTGAGAATTTTGCAGATCCTTCTTCTCCTACAATTTCTTCTTACGAGAATCTGCTCAAAACACC
TACACCTCCAGAAGTTACTACAATTCCAGAAGATATTCGCCAGATTTTATCAAAATACAACTCAAACCTAGCATCTCCAG
TAGCAGTTAGAGCGGTGTCACCCATCAACGTGTTCCTTCCTCGGCATGGAGGACAGAATATGCGAGATGCCAGCAACAAA
GAAAACTGGTGA
ATGGATCCGATCCGAGGCTTTTGCGGGAAGCTGCGGTCTCTGGCCGTCACCTTGGACAGCGAGACGGCCCGGCTGCAGCG
AGCGCTGGACGGAGAGGACAGCGACTTTGAAGACTGTCCAATGAGAGTTCTACATGACCTTAACTCAGAAGTACGAATTC
TAAAGGATGATGTCAATATTCTTCTTGATAAAGCAAACTTGGAAAGTCAAGAAAACATTGGTTTCATAAAAGCAACAAAA
ATATTGATGAGAAAGAATTCAATGGATATCATGAAAATAAAAGAGTTCTTCCAGAAGTATGGATATACTCCACGTGCCAA
GAAAAATTCAGTGGATGAGCAAGAAGTCACTGACTCTAAACCAGAGTCCAGTGAATGTGAACGTCCTGAGAAGCCTGACT
TGAAAGATGATTTGTTGGATTCTGCTGCTGCAAGCACTTCTGTTTCTGAGAAGTCACCGCGTAGTCCACAGCTTTCTGAT
TTTGGACTTGAGCGGTACATCGTATCCCAAGTTCTACCAAACCCTCCCCAAGCAGTAAACAACCAGAAGGAAGAGCCAAA
AATTTTAACTCCATTTTCCAAACACTCACTACTAAAAACTCCAAAATGTGCACTAAAGATGGATGATTTTGAGTGTGTAA
CTCCTAAATTAGAACACTTTGGTATCTCTGAATATACTATGTGTTTAAATGACGATTACACAATTGGACTTAAAAATGTG
AAAACTAACAGTGAGACCATAGAAACAGAACCAGTGCCCAATGATAATGTCTTTGCCACTCCTGGCCTCATAACCCAGCC
ATTGGGAAAAAACAATGCTGAGCATACACATTCTCCCTTGGCACCTACATTCTGCACTCCTGGTTTGAAAGTCCCTTCTA
CAAAGACCAGCACAGCTATGGTATCCACAAACAGTTCATCAAATGACTTAGAAACAAAAGAAAGTACATCATTAGTTTCA
AATTCAGACGAGTGCTTTGAGAATTTTGCAGATCCTTCTTCTCCTACAATTTCTTCTTACGAGAATCTGCTCAAAACACC
TACACCTCCAGAAGTTACTACAATTCCAGAAGATATTCGCCAGATTTTATCAAAATACAACTCAAACCTAGCATCTCCAG
TAGCAGTTAGAGCGGTGTCACCCATCAACGTGTTCCTTCCTCGGCATGGAGGACAGAATATGCGAGATGCCAGCAACAAA
GAAAACTGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 21 .24 RPM |
| SRP017611_kidney | 1 .66 RPM |
| SRP017611_liver | 0 .45 RPM |
| ERP005899_muscle | 5 .91 RPM |
| ERP005899_liver | 1 .44 RPM |
| SRP030211_testis | 74 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000003518 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016915 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_796 | 81.86 | 87.35 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000003314 retrocopies