Parental gene: | NFYA, ENSBTAG00000009905 |
| Aliases: | NFYA, CBF-B, NF-YA |
| Description: | Nuclear transcription factor Y subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q5E9S2] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 23:15006379..15030449(+) |
>ENSBTAG00000009905
ATGGAACAGTATGCAGCAAACAGCAACAGTTCAGCAGAGCAGATTGTTGTACAGGCTGGACAGATTCAGCAGCAGCAGCA
GGGTGGTGTCACTGCTGTCCAGTTGCAGACTGAGGCCCAGGTGGCATCCGCCTCAGGCCAGCAAGTCCAGACCCTGCAGG
TAGTCCAGGGGCAGCCATTAATGGTACAGGTCAGTGGAGGTCAGTTAATCACATCAACTGGCCAACCCATCATGGTCCAG
GCTGTTCCTGGTGGACAAGGTCAAACCATCATGCAAGTACCTGTATCTGGGACACAGGGTTTGCAGCAGATACAGTTGGT
CCCACCGGGACAGATCCAGATCCAGGGTGGGCAGGCCGTGCAAGTGCAGGGCCAGCAGGGCCAGACCCAGCAGATCATCA
TCCAGCAGCCCCAGACAGCCGTCACTGCTGGCCAGACGCAGACACAGCAGCAGATTGCTGTCCAGGGGCAGCAAGTGGCA
CAGACTGCTGAAGGGCAAACCATCGTCTATCAGCCAGTTAATGCAGATGGCACCATTCTCCAGCAAGGCATGATCACCAT
CCCCGCAGCCAGTCTGGCAGGAGCACAGATTGTTCAGACGGGAGCCAACACCAACACAACCAGCAGCGGCCAGGGGACGG
TCACTGTGACGCTGCCAGTGGCAGGCAACGTGGTCAATTCAGGCGGGATGGTCATGATGGTACCTGGTGCTGGCTCTGTG
CCTGCAATCCAGAGAATCCCTCTCCCTGGGGCGGAGATGCTTGAAGAAGAGCCTCTCTATGTCAATGCCAAACAGTACCA
CCGTATACTTAAGAGGAGACAAGCTCGGGCTAAATTAGAAGCAGAAGGGAAAATTCCAAAGGAAAGAAGGAAATACTTGC
ATGAGTCTCGGCACCGTCATGCCATGGCACGGAAGCGTGGTGAAGGCGGACGATTTTTCTCTCCAAAAGAAAAAGATAGT
CCTCATATGCAGGATCCAAATCAAGCCGATGAAGAAGCTATGACACAGATCATCCGAGTGTCCTAA
ATGGAACAGTATGCAGCAAACAGCAACAGTTCAGCAGAGCAGATTGTTGTACAGGCTGGACAGATTCAGCAGCAGCAGCA
GGGTGGTGTCACTGCTGTCCAGTTGCAGACTGAGGCCCAGGTGGCATCCGCCTCAGGCCAGCAAGTCCAGACCCTGCAGG
TAGTCCAGGGGCAGCCATTAATGGTACAGGTCAGTGGAGGTCAGTTAATCACATCAACTGGCCAACCCATCATGGTCCAG
GCTGTTCCTGGTGGACAAGGTCAAACCATCATGCAAGTACCTGTATCTGGGACACAGGGTTTGCAGCAGATACAGTTGGT
CCCACCGGGACAGATCCAGATCCAGGGTGGGCAGGCCGTGCAAGTGCAGGGCCAGCAGGGCCAGACCCAGCAGATCATCA
TCCAGCAGCCCCAGACAGCCGTCACTGCTGGCCAGACGCAGACACAGCAGCAGATTGCTGTCCAGGGGCAGCAAGTGGCA
CAGACTGCTGAAGGGCAAACCATCGTCTATCAGCCAGTTAATGCAGATGGCACCATTCTCCAGCAAGGCATGATCACCAT
CCCCGCAGCCAGTCTGGCAGGAGCACAGATTGTTCAGACGGGAGCCAACACCAACACAACCAGCAGCGGCCAGGGGACGG
TCACTGTGACGCTGCCAGTGGCAGGCAACGTGGTCAATTCAGGCGGGATGGTCATGATGGTACCTGGTGCTGGCTCTGTG
CCTGCAATCCAGAGAATCCCTCTCCCTGGGGCGGAGATGCTTGAAGAAGAGCCTCTCTATGTCAATGCCAAACAGTACCA
CCGTATACTTAAGAGGAGACAAGCTCGGGCTAAATTAGAAGCAGAAGGGAAAATTCCAAAGGAAAGAAGGAAATACTTGC
ATGAGTCTCGGCACCGTCATGCCATGGCACGGAAGCGTGGTGAAGGCGGACGATTTTTCTCTCCAAAAGAAAAAGATAGT
CCTCATATGCAGGATCCAAATCAAGCCGATGAAGAAGCTATGACACAGATCATCCGAGTGTCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 8 .45 RPM |
| SRP017611_kidney | 12 .33 RPM |
| SRP017611_liver | 6 .19 RPM |
| ERP005899_muscle | 14 .94 RPM |
| ERP005899_liver | 8 .00 RPM |
| SRP030211_testis | 20 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004435 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000023405 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_676 | 83.39 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000009905 retrocopies