Parental gene: | UTP6, ENSBTAG00000015612 |
| Aliases: | None |
| Description: | U3 small nucleolar RNA-associated protein 6 homolog [Source:RefSeq peptide;Acc:NP_001092610] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 19:18570890..18598085(+) |
>ENSBTAG00000015612
ATGGCGGAAGTAATTCAGGAACGTGTAGAGGATCGACTTCCCGAATTACAACAGCTGGAGCGCACTGGACTTTTCAGTCA
TGCGGAGATCAAGGCAATCATTAGGAAGGCTTTAGAACTGGAATACAGAATACAGCGAAGAAGTCTTTTAAAGGATGACT
TTATCAGATATGTTCAGTATGAAATTCATCTTTTGGATCTGATCGAGAAAAGGAGAGCTCGCGTTGGATATACATTTAAG
AAGGATGAGATTGAGGATCCTATAATACATCGGATACAGAGTGTCTTCCGACGTGCGTCAATTAAGTGGAAAGATGATGT
TCGACTTTGGCTGTCTTTTATAGCCTTTTGTAGGAAGTGGGCTTCCAACGTTCACCTTAGCAAGATATTTTCTTCCTTGT
TGGCCTTTCATTCAAACAAGCCAGGTTTGTGGATTTTGGCGGCCAAATGGGAACTGGAAGACCGCTTTTCTTCAGAAAGT
GCGAGACAATTATTTCTTCGGGCTCTGCGCTTTCACCCACGTTGCCCGAAACTTTACGAAGAATACTTTAGGATGGAGCT
GATGCATGCTGAAAAATTGAGGAAGGAAAAGCAAGAGTTTGAAAAAGCCAACATGGATGTGGGGAATCTCGAGCATGCTG
AAGAAATCCTTACGGGCGAGTTGGCACGGATCATCTATAAGAATTCTACAAGTGTAATTAAAAGTGCAAAATTTCATGTG
TCACTGCTTTCAATTGCACGGCTGTTCGACTTTGCCAAAGATCTGCAAAGAGAAATTTACAATGACCTTAAGGCTCTGCA
CGCAGATGACCCCGTCACTTGGGACTATGTGGCCCGGCAAGAACTAGTGATTGAATCACAGCCAGTAGAAGAGCTGCCTG
CAACCAAACAAGCCAAAGCGAAGGAGGTGGGCCGCCGGGAGGAGAGGTGCTGTGCTGTATACGAGGAGGCGGTAAAAACT
GTGCCCACAGAGGCTATGTGGAAGTGTTACATGAACTTCTGCATGGAGAGGTTTACTAAGAAGACAAGCAGTCGCCTCCT
CAGAAAGAAGAGGCTGGAAAGAACCATGGTTGCATTCTGGAAGGCACATGAGCTCAAACTTTTACCAGAACTTCAGTACA
GGCAGTTGAGCAAGTTGTTGCTGCATCGCCAGTTGTTAAAGGAATCCCTGGAGGTGGCAGACGCTGGGGTGAAATTGTTC
AAAAAATCAGTGGAGATGTGGCAGGTGAAGCTGGAGGCCCTGATTACGTCAGAGAGCCATGAGATGTCCAAGGGTTTTGA
GCAAGCCTTTGAGTACCTGAAACCTCAGATTTGCCTTCCATTGTGGCTTACTTGGGCCCAGTGGAGTGAAGATGCCGGAA
AGCAAGAAGAAACTGAAGCCATCTATAAGAGAGCTATCTTTGGTCTCCCAGGAGCTGACTCAGTCCCTGTGAAGGAAATG
TATCTGAATTGGGCTTATCGAAGTGGTGGTTACAAAAAGGCCAGAGATGTGTTTAAAAGTTTACAGGAAAACCGTCCATT
TTCAGTTGATTTTTTCAGGAAGATGATCCAGTTTGAGAAGGAGCAAGAATCCTGTAAGATGGAGAACTTAAGAGAGTATT
ATGAAAGGGCTTTGAGAGAATTTGGAACTAATGATTCTGATCTCTGGATGGATTACATCAAAGAAGAATTGAACCACCCG
CTTGGTAGACCTGAGAACTGCGGACAGATCTATTGGCGAGCCATGAAAATGTTGCAGGGAGAGTCAGTAGAGCAGTTTAT
GGCTAAACATGCTTTGTATCAAGCCGGCCGTTTGTGA
ATGGCGGAAGTAATTCAGGAACGTGTAGAGGATCGACTTCCCGAATTACAACAGCTGGAGCGCACTGGACTTTTCAGTCA
TGCGGAGATCAAGGCAATCATTAGGAAGGCTTTAGAACTGGAATACAGAATACAGCGAAGAAGTCTTTTAAAGGATGACT
TTATCAGATATGTTCAGTATGAAATTCATCTTTTGGATCTGATCGAGAAAAGGAGAGCTCGCGTTGGATATACATTTAAG
AAGGATGAGATTGAGGATCCTATAATACATCGGATACAGAGTGTCTTCCGACGTGCGTCAATTAAGTGGAAAGATGATGT
TCGACTTTGGCTGTCTTTTATAGCCTTTTGTAGGAAGTGGGCTTCCAACGTTCACCTTAGCAAGATATTTTCTTCCTTGT
TGGCCTTTCATTCAAACAAGCCAGGTTTGTGGATTTTGGCGGCCAAATGGGAACTGGAAGACCGCTTTTCTTCAGAAAGT
GCGAGACAATTATTTCTTCGGGCTCTGCGCTTTCACCCACGTTGCCCGAAACTTTACGAAGAATACTTTAGGATGGAGCT
GATGCATGCTGAAAAATTGAGGAAGGAAAAGCAAGAGTTTGAAAAAGCCAACATGGATGTGGGGAATCTCGAGCATGCTG
AAGAAATCCTTACGGGCGAGTTGGCACGGATCATCTATAAGAATTCTACAAGTGTAATTAAAAGTGCAAAATTTCATGTG
TCACTGCTTTCAATTGCACGGCTGTTCGACTTTGCCAAAGATCTGCAAAGAGAAATTTACAATGACCTTAAGGCTCTGCA
CGCAGATGACCCCGTCACTTGGGACTATGTGGCCCGGCAAGAACTAGTGATTGAATCACAGCCAGTAGAAGAGCTGCCTG
CAACCAAACAAGCCAAAGCGAAGGAGGTGGGCCGCCGGGAGGAGAGGTGCTGTGCTGTATACGAGGAGGCGGTAAAAACT
GTGCCCACAGAGGCTATGTGGAAGTGTTACATGAACTTCTGCATGGAGAGGTTTACTAAGAAGACAAGCAGTCGCCTCCT
CAGAAAGAAGAGGCTGGAAAGAACCATGGTTGCATTCTGGAAGGCACATGAGCTCAAACTTTTACCAGAACTTCAGTACA
GGCAGTTGAGCAAGTTGTTGCTGCATCGCCAGTTGTTAAAGGAATCCCTGGAGGTGGCAGACGCTGGGGTGAAATTGTTC
AAAAAATCAGTGGAGATGTGGCAGGTGAAGCTGGAGGCCCTGATTACGTCAGAGAGCCATGAGATGTCCAAGGGTTTTGA
GCAAGCCTTTGAGTACCTGAAACCTCAGATTTGCCTTCCATTGTGGCTTACTTGGGCCCAGTGGAGTGAAGATGCCGGAA
AGCAAGAAGAAACTGAAGCCATCTATAAGAGAGCTATCTTTGGTCTCCCAGGAGCTGACTCAGTCCCTGTGAAGGAAATG
TATCTGAATTGGGCTTATCGAAGTGGTGGTTACAAAAAGGCCAGAGATGTGTTTAAAAGTTTACAGGAAAACCGTCCATT
TTCAGTTGATTTTTTCAGGAAGATGATCCAGTTTGAGAAGGAGCAAGAATCCTGTAAGATGGAGAACTTAAGAGAGTATT
ATGAAAGGGCTTTGAGAGAATTTGGAACTAATGATTCTGATCTCTGGATGGATTACATCAAAGAAGAATTGAACCACCCG
CTTGGTAGACCTGAGAACTGCGGACAGATCTATTGGCGAGCCATGAAAATGTTGCAGGGAGAGTCAGTAGAGCAGTTTAT
GGCTAAACATGCTTTGTATCAAGCCGGCCGTTTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 96 .84 RPM |
| SRP017611_kidney | 94 .78 RPM |
| SRP017611_liver | 37 .91 RPM |
| ERP005899_muscle | 47 .25 RPM |
| ERP005899_liver | 43 .26 RPM |
| SRP030211_testis | 419 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Nomascus leucogenys | ENSNLEG00000011009 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_368 | 97.15 | 99.83 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000015612 retrocopies