Parental gene: | RRAGD, ENSBTAG00000018438 |
| Aliases: | None |
| Description: | ras-related GTP-binding protein D [Source:RefSeq peptide;Acc:NP_001179757] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 9:61644456..61743739(+) |
>ENSBTAG00000018438
ATGAGCCAGGTGCTGGGGAAGCCGCAGCCGGAGGAGGAGGAAGACGACGAAGAGGAGGATGAGCTGGTGGGGCTAGCGGA
CTACGGAGACGGGCCCGACTCCTCGGACGCCGAGCCGGACAGCGGGGCGGAGGAGGGAGTTCTGGACTTTAGCGACCCCT
TCAGCACAGAGGTAAAGCCGAGGATCCTGCTCATGGGCCTAAGAAGGAGCGGCAAGTCATCCATCCAGAAAGTCGTCTTT
CATAAAATGTCTCCCAACGAAACTCTGTTCTTGGAGAGCACGAACAAGATCTGCCGGGAGGACGTTTCCAACAGCTCCTT
TGTTAATTTTCAGATTTGGGACTTCCCAGGACAGATTGACTTTTTCGACCCTACCTTTGACTATGAGATGATCTTCCGAG
GAACAGGAGCACTGATATTTGTCATAGACTCCCAGGACGATTACATGGAGGCCTTGGCCAGGCTCCACCTCACAGTGACC
AGGGCCTACAAAGTCAACACCGACATCAACTTTGAGGTGTTTATTCACAAAGTGGATGGTCTGTCAGATGACCACAAAAT
TGAAACCCAGAGAGACATTCACCAGAGGGCAAATGATGACCTTGCAGATGCTGGGCTAGAAAAAATTCATCTCAGCTTTT
ATCTGACAAGCATATATGACCATTCAATATTTGAAGCTTTTAGCAAAGTGGTTCAGAAACTGATTCCACAACTTCCCACC
CTGGAGAATTTGCTAAACATCTTTATCTCAAATTCTGGAATTGAAAAGGCGTTTCTCTTTGATGTGGTCAGTAAGATTTA
TATTGCAACAGATAGTACCCCTGTGGATATGCAAACGTACGAGCTCTGCTGTGACATGATCGATGTGGTCATTGATATTT
CGTGTATTTATGGCCTCAAAGAAGATGGAGCAGGAACCCCCTATGACAAGGAATCAACAGCCATTATAAAGCTGAATAAT
ACAACAGTTCTTTATTTAAAAGAGGTGACAAAGTTCCTGGCTCTTGTGTGCTTTGTCAGAGAGGAAAGCTTTGAAAGAAA
AGGGCTGATTGACTATAATTTTCATTGCTTCCGGAAGGCCATCCATGAAGTTTTTGAGGTGAGAATGAAAGTAGTGAAAT
CGCGAAAGGTTCAGAATCGGCTGCAGAAGAAAAAAGGAGCCACCCCCAACGGGACGCCTAGGGTGCTGCTGTAG
ATGAGCCAGGTGCTGGGGAAGCCGCAGCCGGAGGAGGAGGAAGACGACGAAGAGGAGGATGAGCTGGTGGGGCTAGCGGA
CTACGGAGACGGGCCCGACTCCTCGGACGCCGAGCCGGACAGCGGGGCGGAGGAGGGAGTTCTGGACTTTAGCGACCCCT
TCAGCACAGAGGTAAAGCCGAGGATCCTGCTCATGGGCCTAAGAAGGAGCGGCAAGTCATCCATCCAGAAAGTCGTCTTT
CATAAAATGTCTCCCAACGAAACTCTGTTCTTGGAGAGCACGAACAAGATCTGCCGGGAGGACGTTTCCAACAGCTCCTT
TGTTAATTTTCAGATTTGGGACTTCCCAGGACAGATTGACTTTTTCGACCCTACCTTTGACTATGAGATGATCTTCCGAG
GAACAGGAGCACTGATATTTGTCATAGACTCCCAGGACGATTACATGGAGGCCTTGGCCAGGCTCCACCTCACAGTGACC
AGGGCCTACAAAGTCAACACCGACATCAACTTTGAGGTGTTTATTCACAAAGTGGATGGTCTGTCAGATGACCACAAAAT
TGAAACCCAGAGAGACATTCACCAGAGGGCAAATGATGACCTTGCAGATGCTGGGCTAGAAAAAATTCATCTCAGCTTTT
ATCTGACAAGCATATATGACCATTCAATATTTGAAGCTTTTAGCAAAGTGGTTCAGAAACTGATTCCACAACTTCCCACC
CTGGAGAATTTGCTAAACATCTTTATCTCAAATTCTGGAATTGAAAAGGCGTTTCTCTTTGATGTGGTCAGTAAGATTTA
TATTGCAACAGATAGTACCCCTGTGGATATGCAAACGTACGAGCTCTGCTGTGACATGATCGATGTGGTCATTGATATTT
CGTGTATTTATGGCCTCAAAGAAGATGGAGCAGGAACCCCCTATGACAAGGAATCAACAGCCATTATAAAGCTGAATAAT
ACAACAGTTCTTTATTTAAAAGAGGTGACAAAGTTCCTGGCTCTTGTGTGCTTTGTCAGAGAGGAAAGCTTTGAAAGAAA
AGGGCTGATTGACTATAATTTTCATTGCTTCCGGAAGGCCATCCATGAAGTTTTTGAGGTGAGAATGAAAGTAGTGAAAT
CGCGAAAGGTTCAGAATCGGCTGCAGAAGAAAAAAGGAGCCACCCCCAACGGGACGCCTAGGGTGCTGCTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 20 .78 RPM |
| SRP017611_kidney | 37 .46 RPM |
| SRP017611_liver | 1 .28 RPM |
| ERP005899_muscle | 2 .16 RPM |
| ERP005899_liver | 1 .01 RPM |
| SRP030211_testis | 11 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009368 | within_species_paralog | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000001038 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000015826 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1643 | 86.11 | 90.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000018438 retrocopies