Parental gene: | BT.87407, ENSBTAG00000037935 |
| Aliases: | None |
| Description: | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 [Source:RefSeq peptide;Acc:NP_001033648] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 5:29968852..29979487(-) |
>ENSBTAG00000037935
ATGGCGGCCCGGGCGGGTTTCCAGTCTGTGGCTCCGAGCGGCGGCGCCGGAGCCTCAGGAGGGGCGGGTGCGGCGGCTGC
CCTGGGCCCGGGCGGGACACCGGGGCCTCCGGTGCGAATGGGGCCGGCGCCGGGTCAAGGGCTATACCGCTCCCCGATGC
CTGGAGCGGCCTATCCGAGACCAGGTATGCTACCAGGCAGCCGAATGACACCTCAGGGACCTTCCATGGGACCCCCTGGC
TATGGGGGGAACCCTTCAGTCCGACCTGGCCTGGCCCAGTCAGGGATGGACCAGTCCCGCAAGAGACCTGCGCCTCAGCA
GATCCAGCAGGTCCAGCAGCAGGCGGTCCAAAATCGGAACCACAATGCAAAAAAAAAGAAGATGGCTGACAAAATTCTAC
CTCAAAGGATTCGTGAACTGGTACCAGAATCCCAGGCCTATATGGATCTCTTGGCTTTTGAAAGGAAACTGGACCAGACT
ATCATGAGGAAACGGCTAGATATCCAGGAGGCCTTGAAACGTCCCATCAAGCAAAAACGGAAGCTGCGAATTTTCATTTC
TAACACTTTCAATCCGGCTAAGTCAGATGCCGAGGATGGGGAAGGGACGGTGGCTTCCTGGGAACTTCGGGTAGAAGGAC
GGCTCCTAGAGGATTCTGCCTTGTCCAAATATGATGCCACCAAACAAAAGAGGAAGTTTTCTTCTTTTTTTAAATCCTTG
GTGATCGAACTGGACAAAGACCTGTATGGACCAGACAACCATCTGGTAGAATGGCACAGGACCGCCACTACCCAGGAGAC
GGACGGCTTCCAGGTGAAACGGCCAGGAGACGTGAATGTGCGGTGCACTGTCCTGCTGATGCTGGACTACCAGCCTCCTC
AGTTTAAATTAGACCCTCGTCTGGCTCGGCTCCTGGGCATCCACACCCAGACCCGTCCGGTGATCATTCAAGCACTGTGG
CAATATATTAAGACACACAAGCTCCAGGACCCACATGAGCGGGAGTTTGTCATTTGTGACAAGTACCTCCAGCAGATCTT
TGAGTCTCAGCGTATGAAGTTCTCAGAGATTCCCCAACGGCTCCATGCCTTGCTTATGCCACCTGAGCCCATTATCATAA
ATCATGTCATCAGTGTTGACCCGAATGATCAGAAAAAGACAGCTTGTTATGACATTGATGTGGAAGTGGATGATACCTTG
AAGACCCAGATGAATTCTTTTCTGCTGTCTACTGCCAGCCAGCAGGAGATTGCTACTCTAGACAACAAGATCCATGAGAC
AATAGAGACTATCAATCAGCTGAAGACCCAGCGGGAGTTCATGCTGAGCTTTGCCAGAGACCCTCAGGGTTTCATCAATG
ACTGGCTTCAGTCGCAGTGTCGGGACCTCAAGGTCATGACTGATGTGGTGGGTAACTCAGAGGAGGAGCGCCGAGCAGAG
TTCTACTTCCAGCCTTGGGCCCAGGAGGCCGTGTGTCGATATTTCTACTCCAAGGTGCAGCAGAGACGACAAGAATTAGA
GCAAGCCCTGGGGATCCGAAATACATAG
ATGGCGGCCCGGGCGGGTTTCCAGTCTGTGGCTCCGAGCGGCGGCGCCGGAGCCTCAGGAGGGGCGGGTGCGGCGGCTGC
CCTGGGCCCGGGCGGGACACCGGGGCCTCCGGTGCGAATGGGGCCGGCGCCGGGTCAAGGGCTATACCGCTCCCCGATGC
CTGGAGCGGCCTATCCGAGACCAGGTATGCTACCAGGCAGCCGAATGACACCTCAGGGACCTTCCATGGGACCCCCTGGC
TATGGGGGGAACCCTTCAGTCCGACCTGGCCTGGCCCAGTCAGGGATGGACCAGTCCCGCAAGAGACCTGCGCCTCAGCA
GATCCAGCAGGTCCAGCAGCAGGCGGTCCAAAATCGGAACCACAATGCAAAAAAAAAGAAGATGGCTGACAAAATTCTAC
CTCAAAGGATTCGTGAACTGGTACCAGAATCCCAGGCCTATATGGATCTCTTGGCTTTTGAAAGGAAACTGGACCAGACT
ATCATGAGGAAACGGCTAGATATCCAGGAGGCCTTGAAACGTCCCATCAAGCAAAAACGGAAGCTGCGAATTTTCATTTC
TAACACTTTCAATCCGGCTAAGTCAGATGCCGAGGATGGGGAAGGGACGGTGGCTTCCTGGGAACTTCGGGTAGAAGGAC
GGCTCCTAGAGGATTCTGCCTTGTCCAAATATGATGCCACCAAACAAAAGAGGAAGTTTTCTTCTTTTTTTAAATCCTTG
GTGATCGAACTGGACAAAGACCTGTATGGACCAGACAACCATCTGGTAGAATGGCACAGGACCGCCACTACCCAGGAGAC
GGACGGCTTCCAGGTGAAACGGCCAGGAGACGTGAATGTGCGGTGCACTGTCCTGCTGATGCTGGACTACCAGCCTCCTC
AGTTTAAATTAGACCCTCGTCTGGCTCGGCTCCTGGGCATCCACACCCAGACCCGTCCGGTGATCATTCAAGCACTGTGG
CAATATATTAAGACACACAAGCTCCAGGACCCACATGAGCGGGAGTTTGTCATTTGTGACAAGTACCTCCAGCAGATCTT
TGAGTCTCAGCGTATGAAGTTCTCAGAGATTCCCCAACGGCTCCATGCCTTGCTTATGCCACCTGAGCCCATTATCATAA
ATCATGTCATCAGTGTTGACCCGAATGATCAGAAAAAGACAGCTTGTTATGACATTGATGTGGAAGTGGATGATACCTTG
AAGACCCAGATGAATTCTTTTCTGCTGTCTACTGCCAGCCAGCAGGAGATTGCTACTCTAGACAACAAGATCCATGAGAC
AATAGAGACTATCAATCAGCTGAAGACCCAGCGGGAGTTCATGCTGAGCTTTGCCAGAGACCCTCAGGGTTTCATCAATG
ACTGGCTTCAGTCGCAGTGTCGGGACCTCAAGGTCATGACTGATGTGGTGGGTAACTCAGAGGAGGAGCGCCGAGCAGAG
TTCTACTTCCAGCCTTGGGCCCAGGAGGCCGTGTGTCGATATTTCTACTCCAAGGTGCAGCAGAGACGACAAGAATTAGA
GCAAGCCCTGGGGATCCGAAATACATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 34 .35 RPM |
| SRP017611_kidney | 16 .95 RPM |
| SRP017611_liver | 3 .40 RPM |
| ERP005899_muscle | 10 .77 RPM |
| ERP005899_liver | 3 .32 RPM |
| SRP030211_testis | 19 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Tursiops truncatus | ENSTTRG00000001010 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1829 | 85.42 | 75.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000037935 retrocopies