Parental gene: | DCTN2, ENSCAFG00000000233 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 10:1621067..1634223(-) |
>ENSCAFG00000000233
ATGGCGGACCCCAAATACGCCGACCTTCCCGGCATTGCCAGGAACGAGCCAGATGTTTATGAAACCAGCGACCTACCTGA
AGATGATCAAGCAGAGTTTGATGCGGAGGAGCTGACGAGCACAAGTGTGGAGCACATCATTGTCAATCCCAATGCTGCCT
ATGACAAGTTCAAAGACAAGAGAGTGGGGACAAAGGGACTTGATTTCTCAGATCGTATTGGAAAAACCAAGAGAACAGGA
TATGAATCTGGAGAATATGAGATGCTTGGAGAGGGTCTAGGAGTGAAGGAGACACCCCAGCAAAAGTACCAGCGACTACT
GCATGAGGTCCAAGAGCTGACAACTGAAGTTGAGAAAATCAAGACATCGGTGAAGGAGTCAGCCACTGAAGAGAAGCTGA
CCCCAGTGGTTTTGGCTAAGCAGCTGGCAGCCTTGAAGCAGCAGCTGGTTGCTTCCCACCTGGAGAAGCTGCTGGGACCA
GATGCAGCTATCAACCTTACTGACCCTGATGGAGCTCTGGCTAAGCGCCTGCTGCTGCAGCTGGAAGCAACAAAAAACAG
CAAAGGAACTGGTTCAGGGGGAAAGACCACCGGTGGGACTCCCGTAGATAGTAACCTTGTCACTTACGAACTACATTCTC
GGCCTGAACAGGACAAGTTCTCTCAAGCTGCCAAAGTTGCAGAACTTGAGAAGCGCCTGACAGAGCTGGAAGCCACTGTA
CGCTGTGATCAGGACGCTCAGAATCCCCTTTCAGCAGGTCTACAGGGAGCCTGTCTTATGGAGACTGTAGAACTGTTGCA
AGCAAAGGTGAACGCCCTGGACCTCGCAGTTCTGGACCAAGTGGAGGCTCGGCTACAGAGTGTCCTGGGCAAGGTGAACG
AGATTGCCAAGCATAAAGCTTCTGTAGAGGATGCAGATACACAAAGCAAGGTGCACCAGCTCTATGAAACCATACAGCGC
TGGAGCCCCATCGCCTCCACCCTGCCTGAGCTGGTGCAGAGACTTGTCACCATCAAGCAGCTGCATGAGCAAGCCATGCA
GTTCGGTCAGCTCCTGACACACTTGGATACCACACAGCAGATGATTGCTAGCTCCCTCAAGGACAACACCGCCCTCCTGA
CCCAGGTGCAGACAACCATGCGTGAGAACCTGTCCACAATTGAGGGGAATTTTGCCAACATTGATGAGCGGATGAAGCAG
CTGGGAAAGTGA
ATGGCGGACCCCAAATACGCCGACCTTCCCGGCATTGCCAGGAACGAGCCAGATGTTTATGAAACCAGCGACCTACCTGA
AGATGATCAAGCAGAGTTTGATGCGGAGGAGCTGACGAGCACAAGTGTGGAGCACATCATTGTCAATCCCAATGCTGCCT
ATGACAAGTTCAAAGACAAGAGAGTGGGGACAAAGGGACTTGATTTCTCAGATCGTATTGGAAAAACCAAGAGAACAGGA
TATGAATCTGGAGAATATGAGATGCTTGGAGAGGGTCTAGGAGTGAAGGAGACACCCCAGCAAAAGTACCAGCGACTACT
GCATGAGGTCCAAGAGCTGACAACTGAAGTTGAGAAAATCAAGACATCGGTGAAGGAGTCAGCCACTGAAGAGAAGCTGA
CCCCAGTGGTTTTGGCTAAGCAGCTGGCAGCCTTGAAGCAGCAGCTGGTTGCTTCCCACCTGGAGAAGCTGCTGGGACCA
GATGCAGCTATCAACCTTACTGACCCTGATGGAGCTCTGGCTAAGCGCCTGCTGCTGCAGCTGGAAGCAACAAAAAACAG
CAAAGGAACTGGTTCAGGGGGAAAGACCACCGGTGGGACTCCCGTAGATAGTAACCTTGTCACTTACGAACTACATTCTC
GGCCTGAACAGGACAAGTTCTCTCAAGCTGCCAAAGTTGCAGAACTTGAGAAGCGCCTGACAGAGCTGGAAGCCACTGTA
CGCTGTGATCAGGACGCTCAGAATCCCCTTTCAGCAGGTCTACAGGGAGCCTGTCTTATGGAGACTGTAGAACTGTTGCA
AGCAAAGGTGAACGCCCTGGACCTCGCAGTTCTGGACCAAGTGGAGGCTCGGCTACAGAGTGTCCTGGGCAAGGTGAACG
AGATTGCCAAGCATAAAGCTTCTGTAGAGGATGCAGATACACAAAGCAAGGTGCACCAGCTCTATGAAACCATACAGCGC
TGGAGCCCCATCGCCTCCACCCTGCCTGAGCTGGTGCAGAGACTTGTCACCATCAAGCAGCTGCATGAGCAAGCCATGCA
GTTCGGTCAGCTCCTGACACACTTGGATACCACACAGCAGATGATTGCTAGCTCCCTCAAGGACAACACCGCCCTCCTGA
CCCAGGTGCAGACAACCATGCGTGAGAACCTGTCCACAATTGAGGGGAATTTTGCCAACATTGATGAGCGGATGAAGCAG
CTGGGAAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 71 .77 RPM |
| SRP017611_kidney | 53 .03 RPM |
| SRP017611_liver | 29 .95 RPM |
| SRP012049_cerebellum | 71 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000007137 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000013538 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001840 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000016236 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_385 | 94.55 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_579 | 95.00 | 83.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_1095 | 99.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000000233 retrocopies