Parental gene: | VPS52, ENSCAFG00000000941 |
| Aliases: | None |
| Description: | Canis lupus familiaris vacuolar protein sorting 52 homolog (S. cerevisiae) (VPS52), mRNA. [Source:RefSeq mRNA;Acc:NM_001048088] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 12:2697507..2712831(-) |
>ENSCAFG00000000941
ATGGCAGCTGCTGCGACCATGGCGGCGGCTGCGCGAGAGCTGCTGCTGAGAGCCGGGACCTCGGATATGGAGGAGGAGGA
GGGCCCGCTGGGGGGTGGCCCTGGTCTTCAGGAGCCATTGCCACTTGGAGAATTGGACATCTCCTCTGATGAATTTATTC
TGGATGAAGTGGATGTTCACATTCAGGCAAATCTGGAGGATGAGTTAGTAAAGGAAGCTCTTAAAACGGGTGTGGATCTC
CGTCACTATTCAAAGCAGGTTGAGCTGGAACTACAGCAGATTGAGCAGAAATCCATTCGAGATTATATCCAGGAGAGTGA
GAACATAGCGTCTCTCCACAACCAGATCACAGCCTGCGATGCTGTTCTTGAGCGCATGGAGCAGATGTTGGGAGCTTTTC
AGAGTGACCTCAGCTCTATTAGCTCTGAGATCCGGACACTGCAGGAACAGTCAGGAGCCATGAATATTCGGCTTCGAAAC
CGCCAGGCAGTTCGGGGAAAACTTGGGGAACTTGTCGATGGTCTGATAGTGCCCTCTGCTCTGATCATGGCAATTCTGGA
GGCACCAGTGACAGAGCCTAGGTTCCTGGAGCAGCTGCAGGAACTGGATGCCAAGGCGGCTGCAGTCCGAGAGCAGGAGG
CTAGAGGCACAGCGGCTTGTGCTGATGTCAGAGGCATACTTGACCGGCTACGGGTGAAGGCGGTGACGAAGATCCGAGAG
TTCATCCTTCAGAAGATTTATTCCTTCAGAAAACCAATGACCAACTATCAGATCCCCCAGACGGCCCTGCTCAAGTACAG
GTTCTTCTACCAGTTTCTGCTGGGCAATGAACGGGCAACGGCAAAGGAAATCAGGGATGAGTATGTGGAAACGCTGAGCA
AGATCTACCTGTCTTACTATCGCTCTTACCTAGGGCGGCTCATGAAAGTGCAGTATGAGGAAGTTGCCGAGAAGGATGAT
CTAATGGGTGTGGAAGACACAGCAAAGAAAGGATTCTTCTCAAAGCCTTCCCTCCGCAGCAGGAACACCATCTTCACCCT
GGGGACCCGTGGCTCTGTCATCTCCCCCACTGAACTGGAGGCCCCCATCCTGGTGCCCCACACTGCCCAGCGGGGAGAAC
AGAGGTATCCATTTGAGGCCCTCTTCCGCAGCCAGCACTACGCCCTCCTAGACAATTCTTGCCGTGAATATCTTTTCATC
TGCGAATTCTTTGTTGTATCCGGCTCGGCTGCACATGATCTCTTCCATGCTGTCATGGGTCGCACCCTTGGCATGACCCT
GAAACACCTGGAGTCCTATCTCACGGACTGCTACGATGCCATTGCTGTTTTTCTCTGTATCCACATCGTCCTCCGGTTCC
GTAACATTGCAGCGAAGAGGGATGTTCCTGCCCTGGACAGGTACTGGGAGCAAGTGCTTGCCTTGCTGTGGCCACGGTTT
GAGCTGATCCTGGAGATGAATGTCCAGAGTGTCCGAAGCACTGACCCTCAGCGGCTAGGGGGGCTGGATACTCGGCCCCA
CTATATCACGCGCCGATATGCAGAGTTCTCGTCTGCTCTTGTCAGCATCAATCAGACAGTTCCCAATGAACGGACAATGC
AGCTGCTAGGACAGCTACAGGTGGAAGTGGAGAATTTTGTCCTCCGAGTGGCAGCTGAGTTCTCCTCAAGGAAGGAGCAA
CTTGTGTTTTTGATCAACAACTATGACATGATGCTGGGCGTGCTAATGGAGCGGGCTGCAGATGACAGCAAAGAGGTTGA
GAGTTTCCAGCAGCTGCTCAATGCTCGGACACAGGAATTCATTGAAGAGTTGTTGTCTCCCCCTTTTGGGGGTCTGGTGG
CATTTGTGAAGGAAGCCGAGGCTTTAATTGAACGTGGACAGGCTGAGCGACTTCGAGGGGAAGAAGCCCGGGTTACTCAA
CTGATCCGTGGCTTTGGTAGTTCCTGGAAATCATCAGTGGAGTCTCTGAGTCAGGATGTAATGCGGAGTTTCACCAACTT
CAGAAATGGAACCAGTATCATCCAGGGAGCTTTGACCCAGCTGATCCAGCTCTATCATCGCTTCCACCGGGTACTCTCTC
AGCCCCAGCTCCGAGCTCTCCCTGCCCGGGCAGAGCTTATCAACATTCATCACCTTATGGTGGAGCTCAAGAAGCACAAG
CCCAACTTTTGA
ATGGCAGCTGCTGCGACCATGGCGGCGGCTGCGCGAGAGCTGCTGCTGAGAGCCGGGACCTCGGATATGGAGGAGGAGGA
GGGCCCGCTGGGGGGTGGCCCTGGTCTTCAGGAGCCATTGCCACTTGGAGAATTGGACATCTCCTCTGATGAATTTATTC
TGGATGAAGTGGATGTTCACATTCAGGCAAATCTGGAGGATGAGTTAGTAAAGGAAGCTCTTAAAACGGGTGTGGATCTC
CGTCACTATTCAAAGCAGGTTGAGCTGGAACTACAGCAGATTGAGCAGAAATCCATTCGAGATTATATCCAGGAGAGTGA
GAACATAGCGTCTCTCCACAACCAGATCACAGCCTGCGATGCTGTTCTTGAGCGCATGGAGCAGATGTTGGGAGCTTTTC
AGAGTGACCTCAGCTCTATTAGCTCTGAGATCCGGACACTGCAGGAACAGTCAGGAGCCATGAATATTCGGCTTCGAAAC
CGCCAGGCAGTTCGGGGAAAACTTGGGGAACTTGTCGATGGTCTGATAGTGCCCTCTGCTCTGATCATGGCAATTCTGGA
GGCACCAGTGACAGAGCCTAGGTTCCTGGAGCAGCTGCAGGAACTGGATGCCAAGGCGGCTGCAGTCCGAGAGCAGGAGG
CTAGAGGCACAGCGGCTTGTGCTGATGTCAGAGGCATACTTGACCGGCTACGGGTGAAGGCGGTGACGAAGATCCGAGAG
TTCATCCTTCAGAAGATTTATTCCTTCAGAAAACCAATGACCAACTATCAGATCCCCCAGACGGCCCTGCTCAAGTACAG
GTTCTTCTACCAGTTTCTGCTGGGCAATGAACGGGCAACGGCAAAGGAAATCAGGGATGAGTATGTGGAAACGCTGAGCA
AGATCTACCTGTCTTACTATCGCTCTTACCTAGGGCGGCTCATGAAAGTGCAGTATGAGGAAGTTGCCGAGAAGGATGAT
CTAATGGGTGTGGAAGACACAGCAAAGAAAGGATTCTTCTCAAAGCCTTCCCTCCGCAGCAGGAACACCATCTTCACCCT
GGGGACCCGTGGCTCTGTCATCTCCCCCACTGAACTGGAGGCCCCCATCCTGGTGCCCCACACTGCCCAGCGGGGAGAAC
AGAGGTATCCATTTGAGGCCCTCTTCCGCAGCCAGCACTACGCCCTCCTAGACAATTCTTGCCGTGAATATCTTTTCATC
TGCGAATTCTTTGTTGTATCCGGCTCGGCTGCACATGATCTCTTCCATGCTGTCATGGGTCGCACCCTTGGCATGACCCT
GAAACACCTGGAGTCCTATCTCACGGACTGCTACGATGCCATTGCTGTTTTTCTCTGTATCCACATCGTCCTCCGGTTCC
GTAACATTGCAGCGAAGAGGGATGTTCCTGCCCTGGACAGGTACTGGGAGCAAGTGCTTGCCTTGCTGTGGCCACGGTTT
GAGCTGATCCTGGAGATGAATGTCCAGAGTGTCCGAAGCACTGACCCTCAGCGGCTAGGGGGGCTGGATACTCGGCCCCA
CTATATCACGCGCCGATATGCAGAGTTCTCGTCTGCTCTTGTCAGCATCAATCAGACAGTTCCCAATGAACGGACAATGC
AGCTGCTAGGACAGCTACAGGTGGAAGTGGAGAATTTTGTCCTCCGAGTGGCAGCTGAGTTCTCCTCAAGGAAGGAGCAA
CTTGTGTTTTTGATCAACAACTATGACATGATGCTGGGCGTGCTAATGGAGCGGGCTGCAGATGACAGCAAAGAGGTTGA
GAGTTTCCAGCAGCTGCTCAATGCTCGGACACAGGAATTCATTGAAGAGTTGTTGTCTCCCCCTTTTGGGGGTCTGGTGG
CATTTGTGAAGGAAGCCGAGGCTTTAATTGAACGTGGACAGGCTGAGCGACTTCGAGGGGAAGAAGCCCGGGTTACTCAA
CTGATCCGTGGCTTTGGTAGTTCCTGGAAATCATCAGTGGAGTCTCTGAGTCAGGATGTAATGCGGAGTTTCACCAACTT
CAGAAATGGAACCAGTATCATCCAGGGAGCTTTGACCCAGCTGATCCAGCTCTATCATCGCTTCCACCGGGTACTCTCTC
AGCCCCAGCTCCGAGCTCTCCCTGCCCGGGCAGAGCTTATCAACATTCATCACCTTATGGTGGAGCTCAAGAAGCACAAG
CCCAACTTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 73 .68 RPM |
| SRP017611_kidney | 34 .47 RPM |
| SRP017611_liver | 22 .84 RPM |
| SRP012049_cerebellum | 68 .16 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_621 | 93.95 | 95.85 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000000941 retrocopies