Parental gene: | HDDC2, ENSCAFG00000001030 |
| Aliases: | None |
| Description: | HD domain containing 2 [Source:HGNC Symbol;Acc:21078] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 1:64222093..64247448(-) |
>ENSCAFG00000001030
ATCCCAGTAACACGGAGTAACAGGACTGCTGGACTCTTGCAGTGTTTACATATGTGGACCATTCGGTTGCAGAGAGTCCC
CCGGACGGGCTGGGTATACAGAAGCGTCGAGAGGCCGGAGAGTGTATCGGATCACATGTACCGAATGGCAGTTATGGCTC
TGGTGACCAAAGATGAACACCTTAACAAGGACAGATGTGTACGCCTAGCCCTGGTTCATGATATGGCAGAGAGCATCGTG
GGGGACATAGCACCAGCGGATAACATCCCCAAGGAAGAAAAGCATAGGCGAGAAGAGGAGGCCATGAAGCAGCTAAGCCA
GCTCCTCCCCGAGGATCTCAGGAAGGAACTTTATGAACTTTGGGAAGAGTATGAGAACCAATCTAGCGCAGAAGCTAAAT
TCGTGAAGCAGCTGGACCAATGTGAGATGATCCTGCAGGCATCTGAGTATGAAGACGCTGAGAACAAACCTGGGAGGCTG
CAGGACTTCTTTGATTCCACGGCAGGAAAGTTCAGTCACCCCGAGATAGTCCAGCTGGTTTCTGAACTCGAGGCAGAAAG
AAACGCCAGCATAGCTGCTGCCGCCCGTGAGCCGAGTTCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012049_cerebellum | 16 .88 RPM |
| SRP017611_brain | 31 .12 RPM |
| SRP017611_kidney | 29 .32 RPM |
| SRP017611_liver | 7 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000009635 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000014059 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000011826 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000002258 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_2179 | 67.54 | 56.00 | Please wait, loading  |
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Download FASTA sequences of all ENSCAFG00000001030 retrocopies