Parental gene:

HSDL2, ENSCAFG00000003028

Aliases:None
Description:Canis lupus familiaris hydroxysteroid dehydrogenase like 2 (HSDL2), mRNA. [Source:RefSeq mRNA;Acc:NM_001199130]
Organism:Dog (Canis familiaris)
Coordinates:11:66883021..66944841(+)


>ENSCAFG00000003028
ATGTTACCCAACACCGGGAAGCTAGCAGGATGTACAGTTTTTATCACAGGTGCAAGCCGTGGCATTGGCAAAGCTATTGC
ATTGAAAGCAGCAAAGGATGGAGCAAACATTGTCATTGCTGCGAAGACTACACACGCACACCCCAAGCTTCCAGGCACAA
TCTTTACTGCTGCTGAAGAAATTGAAGCAGCTGGAGGAAAGGCCTTGCCATGTTCTGTTGATGTGAGAGATGAACAGCAA
ATCAGTAATGCAGTGGAGAAAGCAGTGGAGCGATTTGGAGGAATTGATATTTTGGTGAATAATGCCAGTGCTATTAGCTT
GACCAATACATTGGAAACACCTACGAAGAGAGTCGATTTGATGATGAATGTCAACACCAGAGGCACCTATCTGACATCTA
AAGCATGCATTCCTTATTTGAAAAAGAGTAAAATTGCTCATATCCTGAATCTCAGCCCACCACTGAACTTAAATCCAATG
TGGTTCAAACAGCACTGTGCTTATACCATTGCTAAGTATGGTATGTCTATGTGTGTGCTTGGGATGGCAGAAGAATTTAA
GGGTGAAATTGCAGTCAATGCATTATGGCCTAAAACAGCCATCCACACCGCTGCTATGGATATGCTGGGAGGATCTGGTA
TTGAAAGCCAGTGTAGAAAAGTTGAGATCATTGCTGATGCTGCCTATTCCATTTTTAAAAGGCCAAAAAGTTTTACTGGA
AACTTTATTATTGATGAAAATATCTTAAGAGAAGAAGGAATAAAAAATTTTGACATCTATGCAATTAAACCAGGCCATCC
CTTGTTACCAGATTTCTTCTTAGATGAACACCCAGATATAATTATCAAGAAAGCGGAATCACGTGATGTTATTCCGGAAT
TGAAAGAAGAGAAGCCACAGCCACCACCAAAACAACGTTCTGGAGCTGTGGAAGAAACATTTAGAATTGTTAAGGACTCT
CTTAGTGATGACATTGTTAAAGCCACTCAAGCAGTTTATCAGTTTGAACTCTCAGGTGAAGATGGTGGAACGTGGTTTCT
TGATCTTAAAAGCAAAGGTGGGAATGTCGGATATGGAGAGCCCTCCAATCAGGCGGATGTGGTGATGAGTATGTCTACTG
ATGATTTTGTAAAAATGTTTTCAGGAAAACTAAAACCAACAATGGCATTCATGTCAGGAAAATTGAAGATTAAAGGAAAC
ATGGCCCTAGCAATCAAATTGGAGAAGCTAATGAATCAGATGAATGCCAAGCTGTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 26 .00 RPM
SRP017611_brain 17 .55 RPM
SRP017611_kidney 107 .90 RPM
SRP017611_liver 84 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006832 ortholog_one2one 1 retrogene
retro_amel_1368,
Nomascus leucogenys ENSNLEG00000016534 ortholog_one2one 1 retrogene
retro_nleu_649,
Ictidomys tridecemlineatus ENSSTOG00000012222 ortholog_one2one 1 retrogene
retro_itri_471,
Tupaia belangeri ENSTBEG00000013420 ortholog_one2one 2 retrogenes
retro_tbel_2324, retro_tbel_3321,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_480 99.72 85.65
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Download FASTA sequences of all ENSCAFG00000003028 retrocopies