Parental gene: | THAP5, ENSCAFG00000003290 |
| Aliases: | None |
| Description: | THAP domain containing 5 [Source:HGNC Symbol;Acc:23188] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 14:48875044..48880175(-) |
>ENSCAFG00000003290
GCGATGCCTCGCTACTGCGCGGCGATTTGCTGTAAGAACCGTCGGGGACGGAACAGTAAGGACCGGAAGCTGAGTTTTTA
CCCGTTTCCTCTACATGACAAAGAAAGACTTGAAAAATGGTTAAAGAATATGAAACGAGATTCATGGGTACCCAGTAAAT
ACCAGTTCCTGTGTAGTGACCATTTTACTCCTGACTCTCTTGACATCAGATGGGGTATTCGATATTTGAAACAAACTGCA
ATTCCAACAATATTTTCTTTGCCTGAAGACGATCAGGAAAAAGACCCTTCCAAAAAAAAATCTCAGAAGAAAAAATTAGA
TGATGAGAAAGAAGTGTGCCTAAAAGCCAAGTCACAAGAATCATTTGCTTCAAATGAGTTAAAGAAAAATACAGTTAATA
CAAATATTCTCCTTGAACACACAGAATTATGTAATTCATCTACTTTGGTGAAGCCACCAGCTCCCAAACCAGAATGTATA
CAAAATAACGTATTAACTCTTAATCTGCTTAAACAAGATATTGGAATACCAGTATCTACCTTGGAAACTTCAGTTACCCA
AGACATAGATATAGGTGGTTTTCACACATCTTTTGAGAATCTAAATTCTACAACTATTACCTTGACAACTTCAAACTCAG
AAGATGTTCAGCCATCTTTGGAAACCCAAGAAGTGTTTGAAATAACTGCGAATCATCTTGCTAACCCAAACTTTACAAAT
AATTCCATGGAAATTAAGTCCGCACAGGAAAGTCCATTTTTACTCAGCACAATTACTCAAACAGTCGAAGAGTTAAATAC
AAATAAAGAATCTGTTATTGCCATTTTTGTACCCACAGAAAATTCCAAACCAATTAATTCATTTGTATCTGCTGAAAAAG
AAACTGTGGAAATGGAAGATCTAGACATTGAAGACTCCTTATATAAGGATGTAGACTATGAGACAGAAGTTTTACAAATT
GAACATTCTTATTGCAGACAAGATATAAATAAGGAACATCTTTGGCAGAAAGTTTCTAAACTACATTCAAAGATAACTCT
TCTCGAGCTACAAGAACAACAAACTCTTGGAAGATTGAAGTCTTTGGAAGCTCTTATAAGGCAGCTAAAACAAGAAAACT
GGCTATCCGAAGAAAATGTCAAGATTATAGAAAATCATTTCACAACATATGAAGTTACTATGATATAG
GCGATGCCTCGCTACTGCGCGGCGATTTGCTGTAAGAACCGTCGGGGACGGAACAGTAAGGACCGGAAGCTGAGTTTTTA
CCCGTTTCCTCTACATGACAAAGAAAGACTTGAAAAATGGTTAAAGAATATGAAACGAGATTCATGGGTACCCAGTAAAT
ACCAGTTCCTGTGTAGTGACCATTTTACTCCTGACTCTCTTGACATCAGATGGGGTATTCGATATTTGAAACAAACTGCA
ATTCCAACAATATTTTCTTTGCCTGAAGACGATCAGGAAAAAGACCCTTCCAAAAAAAAATCTCAGAAGAAAAAATTAGA
TGATGAGAAAGAAGTGTGCCTAAAAGCCAAGTCACAAGAATCATTTGCTTCAAATGAGTTAAAGAAAAATACAGTTAATA
CAAATATTCTCCTTGAACACACAGAATTATGTAATTCATCTACTTTGGTGAAGCCACCAGCTCCCAAACCAGAATGTATA
CAAAATAACGTATTAACTCTTAATCTGCTTAAACAAGATATTGGAATACCAGTATCTACCTTGGAAACTTCAGTTACCCA
AGACATAGATATAGGTGGTTTTCACACATCTTTTGAGAATCTAAATTCTACAACTATTACCTTGACAACTTCAAACTCAG
AAGATGTTCAGCCATCTTTGGAAACCCAAGAAGTGTTTGAAATAACTGCGAATCATCTTGCTAACCCAAACTTTACAAAT
AATTCCATGGAAATTAAGTCCGCACAGGAAAGTCCATTTTTACTCAGCACAATTACTCAAACAGTCGAAGAGTTAAATAC
AAATAAAGAATCTGTTATTGCCATTTTTGTACCCACAGAAAATTCCAAACCAATTAATTCATTTGTATCTGCTGAAAAAG
AAACTGTGGAAATGGAAGATCTAGACATTGAAGACTCCTTATATAAGGATGTAGACTATGAGACAGAAGTTTTACAAATT
GAACATTCTTATTGCAGACAAGATATAAATAAGGAACATCTTTGGCAGAAAGTTTCTAAACTACATTCAAAGATAACTCT
TCTCGAGCTACAAGAACAACAAACTCTTGGAAGATTGAAGTCTTTGGAAGCTCTTATAAGGCAGCTAAAACAAGAAAACT
GGCTATCCGAAGAAAATGTCAAGATTATAGAAAATCATTTCACAACATATGAAGTTACTATGATATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 20 .48 RPM |
| SRP017611_kidney | 35 .92 RPM |
| SRP017611_liver | 8 .99 RPM |
| SRP012049_cerebellum | 23 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000000456 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000177683 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015130 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008290 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1931 | 93.70 | 95.95 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000003290 retrocopies