Parental gene: | RPL32, ENSCAFG00000004871 |
| Aliases: | EFCAB12, C20H3orf25 |
| Description: | 60S ribosomal protein L32 [Source:UniProtKB/Swiss-Prot;Acc:E2RKA8] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 20:5727168..5756140(+) |
>ENSCAFG00000004871
ATGGACTACGATTCCTATGAAACGTATGAGGCTCTGTTCCTGCCGCTGCTCGAGCTCTGCCATTCTAAGACCTCCAGTGA
TGATGAAAATGCCACCAAGGACCCCATCTTCGATCCTGAACTGGTCATTGCTCACTGCTTCAAGCAGTTCAAGCAGAAGG
ACTTCCACCTGCCTCAGAGCCGCCGGCGGATCATCATCTTGCCTCAAAAAGAGGATCCGATACCCATCAATGTCATGGCC
CAACCCCAGACCCCCCCACAGCCAATCTCCAGCTTCAAAGCCCTGGGAACTGGGGACATCCAAGGGCAGCCAGAGGATGC
GAAGACCTGGCTCAGCCAAAGGTTGAAGCTTCGGAAGAATCTGGAGTCATTTGGCAACATAAAGAGGTGGCTGCAGAACA
AGCCCTGCCTCACCCCTTCAGAGGCCAAGGTCTTATACATGATCCAGAAGAAGCATGAGGCCCAGTTGGTGGCCCATCTA
ACTCCTACCAGAGCCACCAAGTCTGAAATATCCAAGAGCCACCGGCCTTCCCGCCGACTTGTGCCCCAGCTCCGACTACC
CAAGCCCTCTGCCTTGTCAGCCTTGTACTCCTACCTGCACAGCCGGAAGATCAAGATCCTGGAGTTATTTAGCAAGGGGG
ACAGGAGCGAGAGCCAGAGGATCTCTAGGGAGGAGTTCATTGTGGCTCTGAAGGCGGTTGGAGTCCCTCTGAAAAACCAG
GAAGTAGAAGATATAGTGATCTATCTCAGCTCTCTGGGAAAGCAACTTTGGCTTACCATAGGTAAGCAATCAGATTGCGC
TGACTGGCCGTGTGGGAATCTCTCCTTCCTTTCAGATCACAGATCCACCAAGCACAGAATTTCCCCGCAGAGTCCAGCCA
AGAAGCAGGTGGATTTCGCCCCACAGCCTCCCAAGATGGACCTGCTGACTGTGCCTGAGGTTGACACCCAGATGGAGGCA
CGGCCATTGACTCTGGAGGAGATGGAGGATGTTGGCAAGCGGTACCGCGAGAGGAAGCGGCAGCACAAGCTCAAGATCCC
CTCCATCCAGTACATGGAGCGGTGCCGCTTGGTGCGCAGTGGGAATAAGCACTTGGATGAGCACTGCCTCCCGTCCACCA
TCCGAGGGGAGATGGAAGAGCTCATCAACATGTCCCGCAGGGACAACTTTCTGGTCTACCTGCAGTGCTGCAAGCTCTGT
GAGTACTACGGCATCCCGCTGACGGAGGATGTCCTCATGAAAGCCCTGCTGTACCCGGGGGACAAGATCGTTTTCCAGAA
GGACCAGGTGCGCCCAATCCGACAGCCGGGAGGCTACTACTCAGACTTGAAGATCTTCAGTCCAAATCTGGCCCTGCTCA
AACTCCAGGGCTTCAGCGAGGCTGGGGCTAAGAAGACTGACAAGAAAACATTGAAGAAAATCAGGAAGATACACTTTAAG
GAGTTTGAGGAGTTCACCAGGAAGCTGGAAGTGAAGAGGCCCAGGGGTACACAGCGAACTCACCCCAATGTCTTCTGGCC
GGGTCACCTCCTGGACAAGCTGCAGCTCTACTTGCCCACTGTGGCTGTGGACCGGAGCTTGGCACTCTTCAGTTGTGTCC
AACCGCAGCCCTCTGCCTACTCAGCCACCTACCACCCCCACCACTGGTGGCCCATTGGGAACACGAACTATATGACCTGT
GCCTATTACGATGCCCCCAAGGTCTACTACATCGACTAG
ATGGACTACGATTCCTATGAAACGTATGAGGCTCTGTTCCTGCCGCTGCTCGAGCTCTGCCATTCTAAGACCTCCAGTGA
TGATGAAAATGCCACCAAGGACCCCATCTTCGATCCTGAACTGGTCATTGCTCACTGCTTCAAGCAGTTCAAGCAGAAGG
ACTTCCACCTGCCTCAGAGCCGCCGGCGGATCATCATCTTGCCTCAAAAAGAGGATCCGATACCCATCAATGTCATGGCC
CAACCCCAGACCCCCCCACAGCCAATCTCCAGCTTCAAAGCCCTGGGAACTGGGGACATCCAAGGGCAGCCAGAGGATGC
GAAGACCTGGCTCAGCCAAAGGTTGAAGCTTCGGAAGAATCTGGAGTCATTTGGCAACATAAAGAGGTGGCTGCAGAACA
AGCCCTGCCTCACCCCTTCAGAGGCCAAGGTCTTATACATGATCCAGAAGAAGCATGAGGCCCAGTTGGTGGCCCATCTA
ACTCCTACCAGAGCCACCAAGTCTGAAATATCCAAGAGCCACCGGCCTTCCCGCCGACTTGTGCCCCAGCTCCGACTACC
CAAGCCCTCTGCCTTGTCAGCCTTGTACTCCTACCTGCACAGCCGGAAGATCAAGATCCTGGAGTTATTTAGCAAGGGGG
ACAGGAGCGAGAGCCAGAGGATCTCTAGGGAGGAGTTCATTGTGGCTCTGAAGGCGGTTGGAGTCCCTCTGAAAAACCAG
GAAGTAGAAGATATAGTGATCTATCTCAGCTCTCTGGGAAAGCAACTTTGGCTTACCATAGGTAAGCAATCAGATTGCGC
TGACTGGCCGTGTGGGAATCTCTCCTTCCTTTCAGATCACAGATCCACCAAGCACAGAATTTCCCCGCAGAGTCCAGCCA
AGAAGCAGGTGGATTTCGCCCCACAGCCTCCCAAGATGGACCTGCTGACTGTGCCTGAGGTTGACACCCAGATGGAGGCA
CGGCCATTGACTCTGGAGGAGATGGAGGATGTTGGCAAGCGGTACCGCGAGAGGAAGCGGCAGCACAAGCTCAAGATCCC
CTCCATCCAGTACATGGAGCGGTGCCGCTTGGTGCGCAGTGGGAATAAGCACTTGGATGAGCACTGCCTCCCGTCCACCA
TCCGAGGGGAGATGGAAGAGCTCATCAACATGTCCCGCAGGGACAACTTTCTGGTCTACCTGCAGTGCTGCAAGCTCTGT
GAGTACTACGGCATCCCGCTGACGGAGGATGTCCTCATGAAAGCCCTGCTGTACCCGGGGGACAAGATCGTTTTCCAGAA
GGACCAGGTGCGCCCAATCCGACAGCCGGGAGGCTACTACTCAGACTTGAAGATCTTCAGTCCAAATCTGGCCCTGCTCA
AACTCCAGGGCTTCAGCGAGGCTGGGGCTAAGAAGACTGACAAGAAAACATTGAAGAAAATCAGGAAGATACACTTTAAG
GAGTTTGAGGAGTTCACCAGGAAGCTGGAAGTGAAGAGGCCCAGGGGTACACAGCGAACTCACCCCAATGTCTTCTGGCC
GGGTCACCTCCTGGACAAGCTGCAGCTCTACTTGCCCACTGTGGCTGTGGACCGGAGCTTGGCACTCTTCAGTTGTGTCC
AACCGCAGCCCTCTGCCTACTCAGCCACCTACCACCCCCACCACTGGTGGCCCATTGGGAACACGAACTATATGACCTGT
GCCTATTACGATGCCCCCAAGGTCTACTACATCGACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 51 .13 RPM |
| SRP017611_kidney | 519 .25 RPM |
| SRP017611_liver | 122 .62 RPM |
| SRP012049_cerebellum | 200 .54 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_100 | 97.04 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_107 | 94.07 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_177 | 96.30 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cfam_204 | 94.81 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cfam_234 | 97.04 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cfam_1747 | 95.59 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000004871 retrocopies