Parental gene: | THYN1, ENSCAFG00000009772 |
| Aliases: | None |
| Description: | thymocyte nuclear protein 1 [Source:HGNC Symbol;Acc:29560] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 5:995610..999444(+) |
>ENSCAFG00000009772
CTCCGCAGGCATGACCAGTTTCTTCTTGCTTCTGTTGCAGACAGTAAAAGGCCAGCAGGAAAACATACGAAGACTAGGAA
ACCCACGGGGACATCCACTAGAGTGGGTGACTCCAGCCCTGAGAAGACTTCAGCCTCTAAAAACTGTGGGAACAATCAAA
GCAGTTACTGGCTGATGAAGTCTGAGCCACAAAGCCGAATAGAGAAAGGTGTAGATGTGAAGTTCAGCATTGAGGATCTT
AAGGCAGAGCCCAAGCAGACAGCATGCTGGGATGGTGTTCGCAACTACCAGGCCCGGAACTTCCTTCGAGCCATGAAGCT
GGAGCAAAAAGCCTTCTTCTACCATAGCAACTGCAAGGAGCCAGGCATCGCAGGACTAGTGAAGATTGTGAAGGAGGCTT
ACCCAGACCACACACAGTTTGAGAAAAACAATCCCTATTATGACCCATCCAGCAAAGAAGACAACCCCAAGTGGTCCATG
GTGGATGTACAGTTTGTTCGGCTGATGAAGCGTTACATTACCCTGACTGAGCTCAAAGCCAATCACCAAGCCCACAAAGC
CACTGGAGGCCCCTTAAAGAATATGGCTCTGTTCACTCACCCCAGACTCTCCGTTCAGCCCCTGACCCCAGAGGAGTTTG
AGTTTATTTTGAGCCTGGAGGAGAAGGAGCCAAGT
CTCCGCAGGCATGACCAGTTTCTTCTTGCTTCTGTTGCAGACAGTAAAAGGCCAGCAGGAAAACATACGAAGACTAGGAA
ACCCACGGGGACATCCACTAGAGTGGGTGACTCCAGCCCTGAGAAGACTTCAGCCTCTAAAAACTGTGGGAACAATCAAA
GCAGTTACTGGCTGATGAAGTCTGAGCCACAAAGCCGAATAGAGAAAGGTGTAGATGTGAAGTTCAGCATTGAGGATCTT
AAGGCAGAGCCCAAGCAGACAGCATGCTGGGATGGTGTTCGCAACTACCAGGCCCGGAACTTCCTTCGAGCCATGAAGCT
GGAGCAAAAAGCCTTCTTCTACCATAGCAACTGCAAGGAGCCAGGCATCGCAGGACTAGTGAAGATTGTGAAGGAGGCTT
ACCCAGACCACACACAGTTTGAGAAAAACAATCCCTATTATGACCCATCCAGCAAAGAAGACAACCCCAAGTGGTCCATG
GTGGATGTACAGTTTGTTCGGCTGATGAAGCGTTACATTACCCTGACTGAGCTCAAAGCCAATCACCAAGCCCACAAAGC
CACTGGAGGCCCCTTAAAGAATATGGCTCTGTTCACTCACCCCAGACTCTCCGTTCAGCCCCTGACCCCAGAGGAGTTTG
AGTTTATTTTGAGCCTGGAGGAGAAGGAGCCAAGT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 4 .84 RPM |
| SRP017611_kidney | 3 .57 RPM |
| SRP017611_liver | 1 .74 RPM |
| SRP012049_cerebellum | 6 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000007294 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000006567 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000007419 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000008297 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000009185 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_877 | 58.90 | 64.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000009772 retrocopies