Parental gene:

TSPAN5, ENSCAFG00000010287

Aliases:None
Description:tetraspanin 5 [Source:HGNC Symbol;Acc:17753]
Organism:Dog (Canis familiaris)
Coordinates:32:20707387..20877784(-)


>ENSCAFG00000010287
ATGTCCGGGAAGCACTACAAGGGTCCTGAAGTCAGTTGTTGCATCAAATATTTCATATTTGGCTTCAATGTCATATTTTG
GTTTTTGGGAATAGCATTTCTTGGAATCGGACTGTGGGCGTGGAATGAAAAAGGAGTTCTGTCCAACATCTCTTCCATCA
CTGATCTCGGCGGCTTTGACCCAGTTTGGCTCTTCCTGGTGGTGGGAGGAGTGATGTTCATTTTGGGATTCGCAGGGTGC
ATCGGAGCGCTACGGGAAAACACGTTCCTTCTCAAGTTTTTTTCTGTGTTCCTGGGAATTATTTTCTTCCTGGAGCTCAC
TGCTGGGGTTCTGGCATTTGTTTTCAAAGACTGGATCAAAGACCAGCTGTATTTCTTTATAAACAACAACATCAGAGCGT
ACAGAGATGACATTGATTTGCAGAACCTCATAGACTTCACACAGGAATATTGGCAGTGCTGTGGGGCTTTTGGAGCTGAT
GATTGGAACCTAAATATTTACTTCAATTGCACAGATTCCAACGCAAGTCGAGAGCGATGCGGCGTGCCATTCTCCTGCTG
TACTAAAGACCCAGCAGAAGATGTCATCAACACTCAGTGTGGCTACGATGCCAGGCAAAAACCAGAAGTTGACCAGCAGA
TTGTAATCTACACAAAAGGCTGTGTGCCCCAGTTTGAGAAGTGGTTGCAGGACAATTTAACCATCGTGGCTGGTATTTTC
ATAGGCATTGCATTGCTACAGATTTTTGGGATCTGCCTGGCTCAGAACTTGGTTAGTGATATTGAAGCTGTCAGGGCTAG
CTGGTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 166 .61 RPM
SRP017611_brain 148 .07 RPM
SRP017611_kidney 27 .60 RPM
SRP017611_liver 0 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013851 ortholog_one2one 1 retrogene
retro_amel_742,
Canis familiaris ENSCAFG00000016638 within_species_paralog 2 retrogenes
retro_cfam_1585, retro_cfam_704,
Choloepus hoffmanni ENSCHOG00000013549 ortholog_one2one 1 retrogene
retro_chof_2337,
Dasypus novemcinctus ENSDNOG00000012685 ortholog_one2one 1 retrogene
retro_dnov_91,
Echinops telfairi ENSETEG00000007405 ortholog_one2one 1 retrogene
retro_etel_1985,
Pteropus vampyrus ENSPVAG00000003024 ortholog_one2one 1 retrogene
retro_pvam_79,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_314 75.84 55.60
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Download FASTA sequences of all ENSCAFG00000010287 retrocopies