Parental gene: | AP5M1, ENSCAFG00000015249 |
| Aliases: | AP5M1, MUDENG |
| Description: | adaptor-related protein complex 5, mu 1 subunit [Source:HGNC Symbol;Acc:20192] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 8:32847667..32866565(+) |
>ENSCAFG00000015249
ATGGCCCAGCGGGCAGTGTGGCTTATAAGCCACGAGCCGGGAGCTCCACTTGGCGGCACCGTCAGATTCTCCAGACGATA
TCCAACTGTTGAAAAACGAGCCAAAGTCTTCAATGGAGCAAGTTATATGCCTATTCCTGAAGATGGTCCCTTTATGAAAG
CACTACTCTTTGAACTTAGATTATTGGATGATGATAAGGACTTCATAGAAAGCCGTGATAGCTGTTCACACATCAATAAA
ACATCTGTCTATGGACTCCTCATAGGAGGTGGAGAACTCTGGCCAGTTGTTGCGTTTCTGAAGAATAACATGATATATGC
TTGTGTTCCACTAGTTGAACAAACTTTATCCCCTCACCCACCATTAATTAGCATTAGTGGAATTTCACAAGGCTTTGAAC
TTCTTTTTGGGATACAGGATTTTCTTTACTTGGGTCAAAAACATGACACTGAAATAAATACAAAATTGAACCAACTGCCT
GATTTGCTTCTACAAGCTTGTCCATTTGGAACTTTGTTAGATGCCAACTTACAGAATTCATTGGATAGTATTAATTTTGC
TTCTGTGACACATCCACAAAAACAGCCAGCCTGGAAAGTTGGAACATACAAAGGAAAACCACAAGTTTCTATTTCTATCA
CTGAAAAGGTAAAATCCATGCAATATGATAAACAGGATATAGCAGATACATGGCAGGTCGTTGGAGCTGTCACTTGCAAG
TGTGATTTAGAAGGAATTATGCCAAATGTTACCATCAGCTTGAGTCTCCCTACCAATGGGTCTCCACTTCAGGATATTCT
AGTTCATCCTTGTGTGACTTCTCTTGATTCTGCCATTCTGACTTCTAGTAGCATTGATGCAATGGATGATTCTGCATTTA
GCGGACCTTACAAATTTCCATTCACTCCTCCTTTAGAGTCATTCAACTTATGCTACTACACTTCTCAGGTCCCAGTCCCA
CCAATTTTGGGTTTTTATCAAATGAAAGAGGAAGAAATAAAAGTAAAAATAACAGTTAACTTAAAACTTCATGAAAGTGT
GAAAAATAATTTTGAATTCTGTGAAGCTCATATACCTTTCTATAATAGAGGTCCCATCACACATGTGGAATCCAAAGTTA
GTTTTGGCCAGCTTGAAGTATTTCGAGAGAAAAGTTTATTGATCTGGATTATTGGACAGAAGTTCCCCAAATCCATGGAA
ATTAGTCTTTCTGGAACTGTAACTTTTGGAGCTAAGAGTCATGAGAAGCAGCCATTTGATGAGATTTGCATTGGAGGTAC
AGCATATTTAAAGCTTCATTTTAAGATCTTAGATTATACACTCACTGGTTGTTATGCGGATCAGCATTCAGTTCAAGTTT
TTGCATCAGGAAAACCAAAAATAAGTACATACCGGAAACTAATTTCTTCTGACTATTACATCTGGAATTCTAAAGCTCCT
GCACCAGTAGTAACATATGGGTCATTATTACTGTAA
ATGGCCCAGCGGGCAGTGTGGCTTATAAGCCACGAGCCGGGAGCTCCACTTGGCGGCACCGTCAGATTCTCCAGACGATA
TCCAACTGTTGAAAAACGAGCCAAAGTCTTCAATGGAGCAAGTTATATGCCTATTCCTGAAGATGGTCCCTTTATGAAAG
CACTACTCTTTGAACTTAGATTATTGGATGATGATAAGGACTTCATAGAAAGCCGTGATAGCTGTTCACACATCAATAAA
ACATCTGTCTATGGACTCCTCATAGGAGGTGGAGAACTCTGGCCAGTTGTTGCGTTTCTGAAGAATAACATGATATATGC
TTGTGTTCCACTAGTTGAACAAACTTTATCCCCTCACCCACCATTAATTAGCATTAGTGGAATTTCACAAGGCTTTGAAC
TTCTTTTTGGGATACAGGATTTTCTTTACTTGGGTCAAAAACATGACACTGAAATAAATACAAAATTGAACCAACTGCCT
GATTTGCTTCTACAAGCTTGTCCATTTGGAACTTTGTTAGATGCCAACTTACAGAATTCATTGGATAGTATTAATTTTGC
TTCTGTGACACATCCACAAAAACAGCCAGCCTGGAAAGTTGGAACATACAAAGGAAAACCACAAGTTTCTATTTCTATCA
CTGAAAAGGTAAAATCCATGCAATATGATAAACAGGATATAGCAGATACATGGCAGGTCGTTGGAGCTGTCACTTGCAAG
TGTGATTTAGAAGGAATTATGCCAAATGTTACCATCAGCTTGAGTCTCCCTACCAATGGGTCTCCACTTCAGGATATTCT
AGTTCATCCTTGTGTGACTTCTCTTGATTCTGCCATTCTGACTTCTAGTAGCATTGATGCAATGGATGATTCTGCATTTA
GCGGACCTTACAAATTTCCATTCACTCCTCCTTTAGAGTCATTCAACTTATGCTACTACACTTCTCAGGTCCCAGTCCCA
CCAATTTTGGGTTTTTATCAAATGAAAGAGGAAGAAATAAAAGTAAAAATAACAGTTAACTTAAAACTTCATGAAAGTGT
GAAAAATAATTTTGAATTCTGTGAAGCTCATATACCTTTCTATAATAGAGGTCCCATCACACATGTGGAATCCAAAGTTA
GTTTTGGCCAGCTTGAAGTATTTCGAGAGAAAAGTTTATTGATCTGGATTATTGGACAGAAGTTCCCCAAATCCATGGAA
ATTAGTCTTTCTGGAACTGTAACTTTTGGAGCTAAGAGTCATGAGAAGCAGCCATTTGATGAGATTTGCATTGGAGGTAC
AGCATATTTAAAGCTTCATTTTAAGATCTTAGATTATACACTCACTGGTTGTTATGCGGATCAGCATTCAGTTCAAGTTT
TTGCATCAGGAAAACCAAAAATAAGTACATACCGGAAACTAATTTCTTCTGACTATTACATCTGGAATTCTAAAGCTCCT
GCACCAGTAGTAACATATGGGTCATTATTACTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 9 .37 RPM |
| SRP017611_kidney | 16 .38 RPM |
| SRP017611_liver | 3 .48 RPM |
| SRP012049_cerebellum | 10 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002388 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000005943 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013007 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011073 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000010976 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1676 | 79.85 | 53.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000015249 retrocopies