Parental gene: | CKB, ENSCAFG00000018277 |
| Aliases: | None |
| Description: | Creatine kinase B-type [Source:UniProtKB/Swiss-Prot;Acc:P05124] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 8:71284320..71286973(-) |
>ENSCAFG00000018277
ATGCCCTTCTCCAACAGCCACAACACATTGAAGCTCCGTTTCCCGGCCGAGGATGAGTTCCCCGACCTCAGCGCCCACAA
CAACCACATGGCCAAGGTGCTGACCCCCGAGCTCTACGCGGAGCTGCGCGCCAAGAGCACGCCGAGCGGCTTCACGCTGG
ACGACGTCATCCAGACCGGCGTGGACAACCCGGGCCACCCCTACATCATGACCGTGGGCTGCGTGGCAGGCGACGAAGAG
TCCTATGACGTGTTCAAGGAGCTCTTTGACCCCATCATCGAGGACCGGCACGGCGGCTACAAGCCCAGCGACGAGCACAA
GACCGACCTCAACCCCGACAACCTGCAGGGCGGCGACGACCTGGACCCCAACTATGTGCTGAGCTCGCGGGTGCGCACGG
GTCGCAGCATCCGCGGCTTCTGCCTCCCCCCGCACTGCAGCCGCGGGGAGCGCCGTGCCATCGAGAAGCTCGCCGTGGAA
GCTCTGTCGAGCCTGGACGGCGACCTGGCCGGCCGGTACTACGCGCTCAAGAGCATGACCGAGGCGGAGCAGCAGCAGCT
CATCGACGACCACTTCCTCTTCGATAAGCCCGTGTCGCCCCTGCTCCTGGCCTCGGGCATGGCCCGCGACTGGCCGGACG
CCCGCGGCATCTGGCACAATGACAATAAGACCTTCCTGGTGTGGATCAACGAGGAAGACCACCTGCGGGTCATCTCCATG
CAGAAAGGGGGCAACATGAAGGAGGTGTTCACTCGGTTCTGCAACGGCCTCACCCAGATTGAAACACTTTTCAAGTCAAA
GAATTACGAATTCATGTGGAACCCTCACCTGGGCTACATCCTCACCTGCCCATCCAACCTGGGCACAGGCCTGCGGGCAG
GTGTGCACATCAAGCTGCCCCACCTGGGCAAGCACGAGAAGTTCCCGGAGGTGCTCAAGCGGCTGCGGCTTCAGAAACGA
GGCACAGGTGGTGTGGACACAGCTGCGGTGGGTGGCGTCTTTGATGTCTCCAACGCAGACCGCCTGGGCTTCTCAGAGGT
GGAGCTGGTACAGATGGTGGTGGATGGTGTGAAGCTGCTCATCGAGATGGAGCAGCGGCTGGAGCAGGGCCAGGCCATCG
ATGACCTTGTGCCTGCCCAGAAGTGA
ATGCCCTTCTCCAACAGCCACAACACATTGAAGCTCCGTTTCCCGGCCGAGGATGAGTTCCCCGACCTCAGCGCCCACAA
CAACCACATGGCCAAGGTGCTGACCCCCGAGCTCTACGCGGAGCTGCGCGCCAAGAGCACGCCGAGCGGCTTCACGCTGG
ACGACGTCATCCAGACCGGCGTGGACAACCCGGGCCACCCCTACATCATGACCGTGGGCTGCGTGGCAGGCGACGAAGAG
TCCTATGACGTGTTCAAGGAGCTCTTTGACCCCATCATCGAGGACCGGCACGGCGGCTACAAGCCCAGCGACGAGCACAA
GACCGACCTCAACCCCGACAACCTGCAGGGCGGCGACGACCTGGACCCCAACTATGTGCTGAGCTCGCGGGTGCGCACGG
GTCGCAGCATCCGCGGCTTCTGCCTCCCCCCGCACTGCAGCCGCGGGGAGCGCCGTGCCATCGAGAAGCTCGCCGTGGAA
GCTCTGTCGAGCCTGGACGGCGACCTGGCCGGCCGGTACTACGCGCTCAAGAGCATGACCGAGGCGGAGCAGCAGCAGCT
CATCGACGACCACTTCCTCTTCGATAAGCCCGTGTCGCCCCTGCTCCTGGCCTCGGGCATGGCCCGCGACTGGCCGGACG
CCCGCGGCATCTGGCACAATGACAATAAGACCTTCCTGGTGTGGATCAACGAGGAAGACCACCTGCGGGTCATCTCCATG
CAGAAAGGGGGCAACATGAAGGAGGTGTTCACTCGGTTCTGCAACGGCCTCACCCAGATTGAAACACTTTTCAAGTCAAA
GAATTACGAATTCATGTGGAACCCTCACCTGGGCTACATCCTCACCTGCCCATCCAACCTGGGCACAGGCCTGCGGGCAG
GTGTGCACATCAAGCTGCCCCACCTGGGCAAGCACGAGAAGTTCCCGGAGGTGCTCAAGCGGCTGCGGCTTCAGAAACGA
GGCACAGGTGGTGTGGACACAGCTGCGGTGGGTGGCGTCTTTGATGTCTCCAACGCAGACCGCCTGGGCTTCTCAGAGGT
GGAGCTGGTACAGATGGTGGTGGATGGTGTGAAGCTGCTCATCGAGATGGAGCAGCGGCTGGAGCAGGGCCAGGCCATCG
ATGACCTTGTGCCTGCCCAGAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 507 .87 RPM |
| SRP017611_kidney | 66 .37 RPM |
| SRP017611_liver | 8 .70 RPM |
| SRP012049_cerebellum | 509 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ciona intestinalis | ENSCING00000007141 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008667 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000002979 | possible_ortholog | 3 retrogenes | |
| Mus musculus | ENSMUSG00000001270 | possible_ortholog | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008818 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000016459 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_274 | 82.24 | 79.27 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_664 | 91.43 | 55.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_1828 | 88.12 | 52.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cfam_2061 | 89.57 | 55.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cfam_2159 | 86.64 | 64.30 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000018277 retrocopies