Parental gene:

BSG, ENSCAFG00000019717

Aliases:None
Description:basigin (Ok blood group) [Source:HGNC Symbol;Acc:1116]
Organism:Dog (Canis familiaris)
Coordinates:20:57942634..57951740(-)


>ENSCAFG00000019717
ATGGCGGCTCGGGGGCTCGTGGTGCTGGCGCTGGCCCTGCTGGGCGCCGGGGGCGGCTCCGGGGCAGGAAGCGAGATCTT
GACTTCTGTGGAGGACATTGGCTCCAAGATACGCCTTACCTGTTCCTTGAACCGCAGCACCACTGAGATCACCGGCCACC
GCTGGGTGAAGGGGGACAGGGTGCTCAAGGAAGACACGTTCCCTGACCCGAAGACGGAGTATGAGGTGGACTCGGATGAG
CGCTCGGGGGAGTACTCGTGCATCTTCCTCCCAGAGCTTCTGGGCAAGAGCAGCATCGAAGTGAGGGGGCTCCCCAACAT
CAAAGCTGTGAAAAAGTCGGAGCATGCCACCGAGCGGGAGACGGTCGTGCTGGGCTGCAGGTCGGACTCCTTTCCCCCGG
TCACCGACTGGGTGTGGTACAAGGTGGAAAGCTCTGGGGACCAGGTCATCAGCAACAGCTCCCAGAGCAAGTTCCTGGTC
GTGTCCTCGGAGACAAAGACGGAGCTGCGCATCAGCAACCTGGACTTGGAGACCGATCCTGGCAAGTACGTGTGCAACGG
CACGAACTCAGAGGGCACCAGCCAGGCCGTCATCGTGCTGCGCGTGCGAAACCGCTTCGCCGCCCTCTGGCCCTTCCTGG
GCATCGTGGCCGAAGTCCTGGTGCTGGTCACCGTCATCTTCATCTATGAGAAGCGGCGGAAGCCGGATGAGGTCCTGGAT
GACGAGGACACGGGCTCTGCTCCTCTGAAGAGCAGTGGGCACGTCAACGACAAAGGCAAGAACGTTCGCCAGCGGAACGC
CAACTGA

Library Parental gene expression (RPM)
SRP017611_brain 172 .36 RPM
SRP017611_kidney 1043 .52 RPM
SRP017611_liver 302 .67 RPM
SRP012049_cerebellum 227 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000007837 ortholog_one2one 1 retrogene
retro_fcat_822,
Myotis lucifugus ENSMLUG00000009184 ortholog_one2many 1 retrogene
retro_mluc_399,
Monodelphis domestica ENSMODG00000006517 ortholog_one2one 2 retrogenes
retro_mdom_1195, retro_mdom_1203,
Mustela putorius furo ENSMPUG00000009950 ortholog_one2one 1 retrogene
retro_mputfur_878,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1426 63.30 97.01
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Download FASTA sequences of all ENSCAFG00000019717 retrocopies