Parental gene: | ENSCAFG00000028564 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 33:5495154..5498843(+) |
>ENSCAFG00000028564
CAGGCTCAGGCTCAAGGACCCCTCTCAGAGGCCTGTGGGGTTGCTATTAATTATATAGCATCTTATGAGCTGAACGTCAG
TGATGGTTATTTATCTATGGTCTGTTACTTCGATGAAGACCCGGATGCACCTGTTTATGTCCCCTTTTTCCAAGACCAAG
TTGAGGTGAAGAAAGGACACGCAAGGCAGTTCATAAGATACCTGAAGGAGCGTAAGAGTAAAGTCTGCCTTCCAGTGGTT
AAGAGGCTTGACAAAGAGTACTGGGGAACGAACGTGCAAGCTATAGTGATGGCTCTGGAGTTGGAAAACGGGTTACACAA
GCTCCTGCAAGACCTGCAGAACTTGGCTTCTCAGAAGAATGAAACTGATCTCTTAGAATTCCTGAAAAGGTTCGTTGGTA
AACAGAAGAGGAACATAAAATATCTGGAATACCAGCATAGCTATCAGAAGGAGAAGGCATCTCGGAACAGTTTGGTGAAG
CATCAGGCAGACAGGCTTAACATCCGAAGGCAACACAGC
CAGGCTCAGGCTCAAGGACCCCTCTCAGAGGCCTGTGGGGTTGCTATTAATTATATAGCATCTTATGAGCTGAACGTCAG
TGATGGTTATTTATCTATGGTCTGTTACTTCGATGAAGACCCGGATGCACCTGTTTATGTCCCCTTTTTCCAAGACCAAG
TTGAGGTGAAGAAAGGACACGCAAGGCAGTTCATAAGATACCTGAAGGAGCGTAAGAGTAAAGTCTGCCTTCCAGTGGTT
AAGAGGCTTGACAAAGAGTACTGGGGAACGAACGTGCAAGCTATAGTGATGGCTCTGGAGTTGGAAAACGGGTTACACAA
GCTCCTGCAAGACCTGCAGAACTTGGCTTCTCAGAAGAATGAAACTGATCTCTTAGAATTCCTGAAAAGGTTCGTTGGTA
AACAGAAGAGGAACATAAAATATCTGGAATACCAGCATAGCTATCAGAAGGAGAAGGCATCTCGGAACAGTTTGGTGAAG
CATCAGGCAGACAGGCTTAACATCCGAAGGCAACACAGC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 0 .00 RPM |
| SRP017611_kidney | 0 .07 RPM |
| SRP017611_liver | 0 .00 RPM |
| SRP012049_cerebellum | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000015497 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000022867 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_365 | 98.97 | 56.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_448 | 92.05 | 87.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_567 | 95.65 | 53.18 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cfam_715 | 96.58 | 84.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cfam_746 | 92.04 | 65.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cfam_1158 | 95.40 | 50.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_cfam_1163 | 99.03 | 59.54 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_cfam_1432 | 95.56 | 52.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_cfam_1901 | 90.98 | 76.30 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000028564 retrocopies