Parental gene:

C6orf52, ENSCAFG00000030234

Aliases:None
Description:chromosome 6 open reading frame 52 [Source:HGNC Symbol;Acc:20881]
Organism:Dog (Canis familiaris)
Coordinates:35:10422011..10431129(-)


>ENSCAFG00000030234
ATGGCAGGGCAGGAGAGATTTACAGGTTTTTGCATAGCTCCACAAAATAATTATTACTGGCACTGGCAAAGGGGGAAGCC
AGTGTTCCGGCCCTGCCAGGGTTACCCCTCCGGCACCTGGTTTGAGCAACAGCACTGTGGCTACTCCCTTTCTGTCTACG
GCTGTGGCTGTGCAGCAGATGGAAGTGGAAGCCAACGCTCTGTGCGGGAGACCTCTGGATGCCCAGCTCAATCTCTGGTC
ACGCCTAAGGAAAGCACAGCTCTGGCAGAGAAACAAGATGAAGACCCACTTGAAGATCCAAATCTTCATTTGAACATTGA
GGAACTAAACAAGGAGTTTATGGTGAAAAGTGAGGAACTCTATGACTCTCTCATGAGTTGCCACTGGCAGCCTTTGGATA
CAGTTCACTCCGAAATCCCAGATGAGGCCCCCAGAGAAACATGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 0 .17 RPM
SRP017611_brain 0 .00 RPM
SRP017611_kidney 0 .20 RPM
SRP017611_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002583 ortholog_one2one 1 retrogene
retro_amel_1114,
Choloepus hoffmanni ENSCHOG00000010768 ortholog_one2one 2 retrogenes
retro_chof_2530, retro_chof_70,
Equus caballus ENSECAG00000008229 ortholog_one2one 2 retrogenes
retro_ecab_684, retro_ecab_792,
Monodelphis domestica ENSMODG00000028324 ortholog_one2one 12 retrogenes
retro_mdom_1372, retro_mdom_2019, retro_mdom_322, retro_mdom_336, retro_mdom_453, retro_mdom_492, retro_mdom_513, retro_mdom_523, retro_mdom_534, retro_mdom_616, retro_mdom_746, retro_mdom_894,
Tursiops truncatus ENSTTRG00000003650 ortholog_one2one 1 retrogene
retro_ttru_927,
Vicugna pacos ENSVPAG00000003001 ortholog_one2one 2 retrogenes
retro_vpac_198, retro_vpac_609,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1098 63.64 97.28
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Download FASTA sequences of all ENSCAFG00000030234 retrocopies