Parental gene: | PDCD7, ENSCAFG00000032076 |
| Aliases: | None |
| Description: | programmed cell death 7 [Source:HGNC Symbol;Acc:8767] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 30:29497125..29510553(-) |
>ENSCAFG00000032076
AGAAGAAGAAGGCAAATCTCCCACTTCGAAGATCACATNNNNNNNNNNTTGCAGCGCCTGCGCGACTGGCAGTGGCTAGA
GGCGGTGGTCGTGACCCCGCGGCGGGCGGGCTGCCCGGTGCCTCCGCGCGCGCCCGCCGGGCCCAGCCTGGGCGAGGTGC
GCGCGCGGCTGCGCGGGGCTCTGCGCCTGGTGCGGCGGCTGCGCGACCTGGGCCAGGCTCTGCGCGAGGCCGAGGCGGAT
GGCGCGGCCTGGGTGCTGCTGCACGCCCAGGCCGCGCCGCTGCGCGCCGAACTGGCCGAGAGACTCCAGCTGCTGACCCA
GGCCGCCTATGTGGGCGAGGCGCGGCGGAGGCTGGAGAGGGTCCGGCGCCGCCGGCTGCGGCTTCGCGAGAGGGCCCGGG
AACGCGATGCCGAGCGGGAGGCCGAGGCCGCGCGAGCCGCGGAGCGCGAGCAGGAGATTGACCTCTGGAGGGTCAAGTGC
GTGCAGGAGGTGGAGGAGAAGAAGCGGGAACAGGAACTGAAAGCTGCAGCTGATGGTGTCTTATCTGAAGTGAGGAAAAA
GCAGGCAGATACCAAAAGAATGGTGGACATTCTTCGGGCCTTGGAGAAATTGAGGAAACTCAGGAAAGAGGCAGCAGCAA
GGAAAGGCGTCTGTCCTCCAGCTTCAGCAGATGAGACTTTTGAACATCATCTTCAACGACTAAGAAAACTCATTAAAAAA
CGTTCTGAATTATATGAAGCTGAAGAGAGAGCCCTCAGAGTTATGTTGGAAGGAGAACAAGAGGAAGAGAGGAAAAGAGA
ATTAGAAAAGAAACAGAGGAAAGAAAAAGAGAAAATTTTACTTCAGAAGCGTGAAATTGAGTCCAAGTTATTTGGGGATC
CAGATGAGTTCCCACTCGCTCACCTCTTGCAACCCTTCCGACAGTATTACCTCCAAGCTGAGCACTCCCTGCCAGCACTC
ATCCAAATAAGGCATGATTGGGATCAGTACCTGGTGCCATCTGATCATCCCAAAGGCAACTCCGTTCCCCAAGGATGGGT
CCTTCCCCCGCTCCCCAGCAACGACATCTGGGCAACGGCCATTAAGCTGCATTAG
AGAAGAAGAAGGCAAATCTCCCACTTCGAAGATCACATNNNNNNNNNNTTGCAGCGCCTGCGCGACTGGCAGTGGCTAGA
GGCGGTGGTCGTGACCCCGCGGCGGGCGGGCTGCCCGGTGCCTCCGCGCGCGCCCGCCGGGCCCAGCCTGGGCGAGGTGC
GCGCGCGGCTGCGCGGGGCTCTGCGCCTGGTGCGGCGGCTGCGCGACCTGGGCCAGGCTCTGCGCGAGGCCGAGGCGGAT
GGCGCGGCCTGGGTGCTGCTGCACGCCCAGGCCGCGCCGCTGCGCGCCGAACTGGCCGAGAGACTCCAGCTGCTGACCCA
GGCCGCCTATGTGGGCGAGGCGCGGCGGAGGCTGGAGAGGGTCCGGCGCCGCCGGCTGCGGCTTCGCGAGAGGGCCCGGG
AACGCGATGCCGAGCGGGAGGCCGAGGCCGCGCGAGCCGCGGAGCGCGAGCAGGAGATTGACCTCTGGAGGGTCAAGTGC
GTGCAGGAGGTGGAGGAGAAGAAGCGGGAACAGGAACTGAAAGCTGCAGCTGATGGTGTCTTATCTGAAGTGAGGAAAAA
GCAGGCAGATACCAAAAGAATGGTGGACATTCTTCGGGCCTTGGAGAAATTGAGGAAACTCAGGAAAGAGGCAGCAGCAA
GGAAAGGCGTCTGTCCTCCAGCTTCAGCAGATGAGACTTTTGAACATCATCTTCAACGACTAAGAAAACTCATTAAAAAA
CGTTCTGAATTATATGAAGCTGAAGAGAGAGCCCTCAGAGTTATGTTGGAAGGAGAACAAGAGGAAGAGAGGAAAAGAGA
ATTAGAAAAGAAACAGAGGAAAGAAAAAGAGAAAATTTTACTTCAGAAGCGTGAAATTGAGTCCAAGTTATTTGGGGATC
CAGATGAGTTCCCACTCGCTCACCTCTTGCAACCCTTCCGACAGTATTACCTCCAAGCTGAGCACTCCCTGCCAGCACTC
ATCCAAATAAGGCATGATTGGGATCAGTACCTGGTGCCATCTGATCATCCCAAAGGCAACTCCGTTCCCCAAGGATGGGT
CCTTCCCCCGCTCCCCAGCAACGACATCTGGGCAACGGCCATTAAGCTGCATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 12 .94 RPM |
| SRP017611_kidney | 5 .68 RPM |
| SRP017611_liver | 4 .28 RPM |
| SRP012049_cerebellum | 13 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007218 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000014340 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_2181 | 74.41 | 57.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000032076 retrocopies