Parental gene: | PTBP3, ENSCHOG00000002039 |
| Aliases: | None |
| Description: | polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:10253] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_2562:10365..73367(-) |
>ENSCHOG00000002039
ACTCTTCTTCCACCTCGGACCGGTCGGGGCTCCGGAGAGTCTCGGCTCGCCAGTCCCTGGGGCTTCCCTGTTGCCGCCAC
CCGTTCGCGGCGAGCCCGTCAGTCCCCGCATAGTGCGCTTCTTCATCTGGGCCATGGATGGCGGAGATCTGATGAGCTTC
TTTCTTCTGGCATCATTAATGAACCTTTTACCATGAACAATTCCACTCCTACCACAGGTGTGTTTGCTAATGGGAATGAC
AACAAGAAATTTAAAGGAGATAGAACTCCCTGTTCACCTTCCCGTGTTCTCCATCTTCGCCAAATTCCAAGTGATGTCAC
CGAAGCAGAGGTCATATCATTAGGTCTACCATTTGGCAAAGTAACTAATCTTTTGATGTTGAAAGGAAAAAGCCAGGCTT
TCTTAGAAATGGCTTCTGAGGAAGCTGCTGTAACTATGGTGAATTATTACACTCCTGTTACTCCTCACCTACGAAGCCAG
CCTGTTTATATCCAGTATTCCAATCATAGAGAACTCAAGACTGACAATCTGCCTAATCAAGCTAGAACCCAAGCTGCATT
GCAGGCCATCAGTGCTGTCCAGTCAGGAAACCTGGCCCTTACTGGAACTGCTACCAATGAAGGCACAGTCCTGCCTGGGC
AAAGCCCTGTGCTCCGAATAATTATTGAAAACCTGTTTTACCCTGTTACTCTGGAAGTTCTTCATCAGATATTTTCTAAA
TTTGGCGCAGTCTTGAAGATTATCACCTTTACAAAGAATAATCAGTTTCAAGCCTTGCTTCAGTATGCTGACCCAATGAA
TGCACATTATGCTAAAATGGCTCTGGATGGCCAGAATATCTATAATGCATGCTGCACTCTACGCATTGACTTCTCCAAGC
TCACCAGCCTTAATGTGAAATATAATAATGACAAAAGCAGAGACTTCACTCGCTTAGACCTTCCTACTGGTGATGGCCAG
CCATCCCTTGAACCCCCTATGGCTGCTGCTTTTGGTGCACCGGGTATAATTTCCTCACCGTATGCAGGGGCTGCTGGATT
TGCCCCAGCCATTGGATTTCCTCAAGCTACAGGTCTTTCAGTCCCAGCTGTTCCTGGAGCTCTTGGTCCTCTCACAATCA
CCCCCTCTGCTGTCACTGGAAGGATGGCCATTCCTGGGGCCAGTGGGATGCCAGGAAATTCTGTTCTCCTTGTCACCAAT
CTCAATCCTGATCTTATCACACCACATGGGCTTTTTATCCTATTTGGAGTGTATGGTGATGTACATCGAGTGAAAATTAT
GTTTAATAAGAAAGAAAATGCCTTGGTTCAGATGGCAGATGCAAATCAAGCTCAACTAGCAATGAATCATCTGAGTGGTC
AGAGACTTTATGGAAAAGTGCTTCGTGCTACACTGTCCAAGCATCAAACAGTTCAGCTTCCTCGAGAGGGACAAGAAGAC
CAAGGTCTGACTAAGGATTTCAGCAATAGTCCTTTGCATCGCTTCAAAAAGCCTGGCTCTAAAAACTTCCAGAATATTTT
CCCACCATCAGCCACTCTGCATCTTTCCAACATCCCCCCTTCTGTTACAGTGGATGATCTGAAGAACCTTTTCACAGACA
CTGGATGTTCAGTGAAGGCTTTTAAATTCTTTGCAAACTTCACCTCCAAGTCATTAGGCAGCAGTATTTATACAAGTATA
TCATCACACAGTTTCTCTTTTCCTCCCCCTAAAATTTGGGCAAAAGAT
ACTCTTCTTCCACCTCGGACCGGTCGGGGCTCCGGAGAGTCTCGGCTCGCCAGTCCCTGGGGCTTCCCTGTTGCCGCCAC
CCGTTCGCGGCGAGCCCGTCAGTCCCCGCATAGTGCGCTTCTTCATCTGGGCCATGGATGGCGGAGATCTGATGAGCTTC
TTTCTTCTGGCATCATTAATGAACCTTTTACCATGAACAATTCCACTCCTACCACAGGTGTGTTTGCTAATGGGAATGAC
AACAAGAAATTTAAAGGAGATAGAACTCCCTGTTCACCTTCCCGTGTTCTCCATCTTCGCCAAATTCCAAGTGATGTCAC
CGAAGCAGAGGTCATATCATTAGGTCTACCATTTGGCAAAGTAACTAATCTTTTGATGTTGAAAGGAAAAAGCCAGGCTT
TCTTAGAAATGGCTTCTGAGGAAGCTGCTGTAACTATGGTGAATTATTACACTCCTGTTACTCCTCACCTACGAAGCCAG
CCTGTTTATATCCAGTATTCCAATCATAGAGAACTCAAGACTGACAATCTGCCTAATCAAGCTAGAACCCAAGCTGCATT
GCAGGCCATCAGTGCTGTCCAGTCAGGAAACCTGGCCCTTACTGGAACTGCTACCAATGAAGGCACAGTCCTGCCTGGGC
AAAGCCCTGTGCTCCGAATAATTATTGAAAACCTGTTTTACCCTGTTACTCTGGAAGTTCTTCATCAGATATTTTCTAAA
TTTGGCGCAGTCTTGAAGATTATCACCTTTACAAAGAATAATCAGTTTCAAGCCTTGCTTCAGTATGCTGACCCAATGAA
TGCACATTATGCTAAAATGGCTCTGGATGGCCAGAATATCTATAATGCATGCTGCACTCTACGCATTGACTTCTCCAAGC
TCACCAGCCTTAATGTGAAATATAATAATGACAAAAGCAGAGACTTCACTCGCTTAGACCTTCCTACTGGTGATGGCCAG
CCATCCCTTGAACCCCCTATGGCTGCTGCTTTTGGTGCACCGGGTATAATTTCCTCACCGTATGCAGGGGCTGCTGGATT
TGCCCCAGCCATTGGATTTCCTCAAGCTACAGGTCTTTCAGTCCCAGCTGTTCCTGGAGCTCTTGGTCCTCTCACAATCA
CCCCCTCTGCTGTCACTGGAAGGATGGCCATTCCTGGGGCCAGTGGGATGCCAGGAAATTCTGTTCTCCTTGTCACCAAT
CTCAATCCTGATCTTATCACACCACATGGGCTTTTTATCCTATTTGGAGTGTATGGTGATGTACATCGAGTGAAAATTAT
GTTTAATAAGAAAGAAAATGCCTTGGTTCAGATGGCAGATGCAAATCAAGCTCAACTAGCAATGAATCATCTGAGTGGTC
AGAGACTTTATGGAAAAGTGCTTCGTGCTACACTGTCCAAGCATCAAACAGTTCAGCTTCCTCGAGAGGGACAAGAAGAC
CAAGGTCTGACTAAGGATTTCAGCAATAGTCCTTTGCATCGCTTCAAAAAGCCTGGCTCTAAAAACTTCCAGAATATTTT
CCCACCATCAGCCACTCTGCATCTTTCCAACATCCCCCCTTCTGTTACAGTGGATGATCTGAAGAACCTTTTCACAGACA
CTGGATGTTCAGTGAAGGCTTTTAAATTCTTTGCAAACTTCACCTCCAAGTCATTAGGCAGCAGTATTTATACAAGTATA
TCATCACACAGTTTCTCTTTTCCTCCCCCTAAAATTTGGGCAAAAGAT
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ciona savignyi | ENSCSAVG00000007421 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000011358 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_1487 | 92.04 | 53.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_2474 | 67.98 | 56.60 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000002039 retrocopies