Parental gene: | ELF2, ENSCJAG00000003174 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 3:53907667..53997721(+) |
>ENSCJAG00000003174
ATGACATCAGCAGTGGTTGACAGTGGAGGTACTGTTTTGGAGCTTTCCAGCAATGGAGTAGAAAATCAAGAGGAAAGTGA
AAAGGTTTCTGAATATCCAGCAGTGATTGTGGAGCCAGTTCCAAGTGCCAGATTAGAGCAGGGCTATGCAGCCCAGGTTC
TGGTTTATGATGATGAGACTTATATGATGCAAGATGTGGCAGAAGAACAAGAAGTTGAGACCGAGAATGTGGAAACAGTG
GAAGCATCAGTTCATAGCAGTAATGCACACTGTACAGATAAGACAATTGAAGCTGCTGAAGCCCTGCTTCATATGGAATC
TCCTACCTGCTTGAGGGATTCAAGAAGTCCTGTGGAAGTGTTTGTTCCTCCTTGTGTATCAACTCCAGAATTTATCCATG
CTGCTATGAGGCCAGATGTCATTACAGAAACTGTAGTGGAGGTGTCAACTGAAGAGTCTGAACCAATGGATACCTCTCCT
ATTCCTACATCACCAGATAGCCATGAACCAATGAAAAAGAAAAAAGTTGGACGTAAACCAAAGACCCAGCAATCACCAAT
TTCCAATGGGTCTCCTGAGTTAGGTATAAAGAAGAAACCGAGAGAAGGAAAAGGAAACACAACCTATTTGTGGGAGTTTC
TTTTAGATCTACTTCAAGATAAAAATACTTGTCCCCGATATATTAAATGGACTCAGAGAGAAAAAGGCATATTCAAGCTG
GTGGATTCAAAGGCTGTCTCTAAGCTTTGGGGAAAGCATAAGAACAAACCGGACATGAACTATGAAACTATGGGACGAGC
TTTGAGATACTACTACCAAAGGGGAATTCTTGCAAAAGTTGAAGGACAGAGGCTTGTATATCAGTTCAAGGATATGCCCA
AAAACATAGTGGTCATAGATGATGACAAAAGTGAAACCTGTAATGAAGATTTAGCAGGAGCTACTGATGAAAAATCATTA
GAACGAGTGTCACTGTCTGCAGAAAGTCTCCTGAAAGCAGCATCCTCTGTTCGTGGTGGAAAAAATTCATCCTCTATAAA
CTGCTCCAGAGCAGAGAAGGGTGTAGCCAGAGTTGTGAATATCACTTCCTCTGGTCATGATGCTTCATCCAGGTCTCCTA
CTACCACTGCATCTGTATCAGCAACAGCAGCTCCAAGGACAGTTCGTGTGGCAATGCAAGTACCTGTTGTAATGACATCA
TTGGGTCAGAAAATTTCAACTGTGGCAGTTCAGTCAGTTAATGCAGGTGCACCATTAATAACCAGCACTAGTCCAACAAC
AGCAACCTCTCCAAAGGTAGTCATTCAGACAATCCCTACTGTGATGCCAGCTTCTACTGAAAATGGAGACAAAATCACCA
TGCAGCCTGCCAAAATTATTACCATCCCAGCTACACAGCTTGCACAGTGTCAACTGCAGACAAAGTCAAATCTGACTGGA
TCAGGAAGCATTAACATTGTTGGAACCCCACTGGCTGTGAGAGCACTTACCCCTGTTTCAATAGCCCATGGTACACCTGT
AATGAGACTATCAATGCCTACTCAGCAGGCATCTGGCCAGACTCCTCCTCGAGTTATCAGTGCAGTCATAAAGGGGCCAG
AGGTTAAATCAGAAGCAGTGGCAAAAAAGCAAGAACATGATGTGAAAACTTTGCAGCTGGTGGAAGAAAAACCGGCAGAT
GGAAATAAGACAGTGACCCACGTAGTGGTTGTCAGTGCGCCTTCAGCTATTGCCCTTCCTGTAACTATGAAAACAGAAGG
ACTAGTGACATGTGAGAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 31 .40 RPM |
| SRP051959_heart | 38 .62 RPM |
| SRP051959_kidney | 35 .76 RPM |
| SRP051959_liver | 26 .43 RPM |
| SRP051959_lung | 49 .10 RPM |
| SRP051959_lymph_node | 52 .97 RPM |
| SRP051959_skeletal_muscle | 25 .90 RPM |
| SRP051959_spleen | 46 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000109381 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000004984 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015068 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000016449 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_540 | 77.75 | 59.36 | Please wait, loading  |
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Download FASTA sequences of all ENSCJAG00000003174 retrocopies