Parental gene:

ENSCJAG00000003979

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:11734759..11754977(+)


>ENSCJAG00000003979
ATGATGGCTCAGTCCAACATGCTCCCCGTGGCTGATGTGTTGAGTCAAGATGAACTGCGCAAAAAACTATACCAGACGTT
TAAGGATCGGGGTATACTGGACACACTCAAGACGCAACTTCGAAACCAGCTAATTCATGAGCTGATGCACCCTGTATTGA
GTGGAGAACTGCAACCTCGGTCCATTTCAGTGGAAGGCAGCTCCCTCTTCATAGGCGCCTCTAACTCTTTAGTGGCAGAT
CACTTACAAAGATGTGGCTATGAATATTCACTTTCTGTTTTCTTTCCAGAAAGTGGTTTGGCAAAAGAAAAGGTATTTAC
TATGCAGGATCTATTACAACTCATTAAAATCAACCCTACTTCCAGTCTCTACAAATCACTGGTTTCAGGATCTGATAAGG
ACAACCAAAAAGGTTTTCTTATGCATTTTTTAAAAGAACTGGCAGAGTATCATCAAGCTAAAGAGGGCTGTAATATGGAA
ACTCAGACAAGTTCGATATTTAGCAGAGATTCTCTGGCTGAGAAGCTTCAGCTTATTGATGATCAGTTTGCAGATGCTTA
CCCTCAGCGTGTCAAGTTTGAGTCTTTAGAAATAAAGCTAAATGAATACAAGAGAGAAATAGAAGAGCAACTGCGGGCAG
AAATGTGTCAAAAGTTGAAGATTTTTAAAGATACCGAGATAGCAAAAATTAAAATGGAAGCGAAAAAAAAGTATGAGAAG
GAATTAGCCATGTTCCAGAATGATTTTGAGAAAGCTTGTCAAGCAAAATCTGAAGCTCTCATTCTTCGGGAAAAGAGTAC
CCTCGAGAGAATTCAGAAGCACCAAGAGATTGAAACAAAAGAAATTTATGCTCAAAGGCAACTTTTACTAAAAGATATGG
ATTTGCTAAGAGGAAGAGAAGCAGAGCTGAAGCAAAGAGTTGAAGCTTTTGAATTGCACCAGAAGCTCCAGGAAGAAAAA
CATAAAAGCGTGACTGAGGCACTTAGGAGACGGGAGCAGAATATAAAGAGTTTTGAAGAGACCTATGATCAAAAGCTGAA
GAATGAACTTCTAAACTTCCACAGGCTGCATGATGTCTGTCTGGCTTTGGGAATCCTCATATGA

Library Parental gene expression (RPM)
SRP051959_colon 9 .52 RPM
SRP051959_heart 8 .84 RPM
SRP051959_kidney 12 .38 RPM
SRP051959_liver 5 .76 RPM
SRP051959_lung 12 .92 RPM
SRP051959_lymph_node 13 .01 RPM
SRP051959_skeletal_muscle 6 .88 RPM
SRP051959_spleen 11 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000046651 ortholog_one2many 1 retrogene
retro_hsap_3164,
Gorilla gorilla ENSGGOG00000006453 ortholog_one2many 1 retrogene
retro_ggor_1352,
Nomascus leucogenys ENSNLEG00000009180 ortholog_one2many 1 retrogene
retro_nleu_2496,
Pan troglodytes ENSPTRG00000021675 ortholog_one2many 1 retrogene
retro_ptro_2274,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2845 92.35 96.19
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Download FASTA sequences of all ENSCJAG00000003979 retrocopies