Parental gene:

ATAD1, ENSCJAG00000005296

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:12:74344296..74401298(-)


>ENSCJAG00000005296
ATGCATGTTACTTGGAGTGATATAGCAGGTTTAGATGATGTCATTACGGATCTGAAAGACACCGTCATCTTACCTATCAA
AAAGAAACATTTGTTTGAGAATTCCAGGCTTCTACAACCTCCAAAAGGTGTTCTTCTCTATGGGCCTCCAGGCTGTGGTA
AAACATTGATTGCCAAGGCCACAGCCAAAGAAGCAGGCTGTCGATTTATTAACCTTCAGCCTTCAACACTGACTGATAAG
TGGTATGGAGAATCTCAAAAATTGGCTGCTGCTGTCTTCTCCCTTGCCATAAAGCTACAACCATCCATCATCTTTATAGA
TGAAATAGACTCCTTTCTACGAAACCGTTCAAGTTCTGACCATGAAGCTACAGCCATGATGAAAGCTCAGTTTATGAGTC
TCTGGGATGGATTGGATACTGATCACAGCTGCCAGGTCATAGTAATGGGAGCTACCAATCGTCCTCAGGACCTCGACTCG
GCTATAATGAGAAGAATGCCTACAAGATTTCATATCAACCAGCCTGCTTTAAAACAGAGAGAAGCAATCCTGAAACTCAT
CTTGAAAAATGAAAATGTGGACAGGCATGTAGACCTGCTCGAAGTTGCCCAGGAAACAGATGGGTTTTCAGGAAGTGACC
TAAAAGAGATGTGTCGAGATGCTGCCCTCCTCTGTGTTAGAGAATATGTTAATTCTACAGCAGAAGAAAGCCATGATGAA
GATGAAATCCGGCCTGTTCAACAGCAGGACCTGCATCGAGCAATTGAAAAGATGAAGAAATCAAAGGATGCAGCATTTCA
GAATGTTTTAACACATGTTTGTTTAGATTAA

Library Parental gene expression (RPM)
SRP051959_colon 20 .68 RPM
SRP051959_heart 23 .12 RPM
SRP051959_kidney 25 .07 RPM
SRP051959_liver 13 .73 RPM
SRP051959_lung 22 .34 RPM
SRP051959_lymph_node 18 .95 RPM
SRP051959_skeletal_muscle 24 .92 RPM
SRP051959_spleen 17 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000138138 ortholog_one2one 1 retrogene
retro_hsap_1900,
Gorilla gorilla ENSGGOG00000026651 ortholog_one2one 1 retrogene
retro_ggor_1393,
Macaca mulatta ENSMMUG00000006414 ortholog_one2many 1 retrogene
retro_mmul_608,
Nomascus leucogenys ENSNLEG00000012135 ortholog_one2one 1 retrogene
retro_nleu_1231,
Oryctolagus cuniculus ENSOCUG00000012082 ortholog_one2one 1 retrogene
retro_ocun_1634,
Pan troglodytes ENSPTRG00000002717 ortholog_one2one 1 retrogene
retro_ptro_1255,
Pteropus vampyrus ENSPVAG00000014020 ortholog_one2one 1 retrogene
retro_pvam_1080,
Rattus norvegicus ENSRNOG00000010861 ortholog_one2one 1 retrogene
retro_rnor_2752,
Ictidomys tridecemlineatus ENSSTOG00000006563 ortholog_one2one 1 retrogene
retro_itri_309,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1101 80.58 98.91
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Download FASTA sequences of all ENSCJAG00000005296 retrocopies