Parental gene:

ENSCJAG00000007137

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:9:18820052..18825280(-)


>ENSCJAG00000007137
ATGGCCCAGAACTTGAAGGACTTGGCGGGACGGCTGCCCGCCGGGCCCCGGGGCATGGGCACCGCGCTGAAGCTGCTGCT
GGGGGCTGGCGCCGTGGCCTATGGTGTCCGGGAATCCGTGTTCACCGTGGAAGGCGGGCACAGAGCAATCTTCTTCAATC
GGATCGGTGGAGTGCAGCAGGACACTATCCTGGCCGAGGGCCTTCACTTCAGGATCCCCTGGTTCCAGTACCCCATTATC
TATGACATTCGGGCCAGACCTCGAAAAATCTCCTCCCCTACAGGCTCCAAAGACCTGCAGATGGTGAATATCTCCCTGCG
AGTGCTGTCTCGACCCAATGCTCAGGAGCTTCCTAGCATGTACCAGCGCCTAGGGCTAGACTACGAGGAACGAGTGTTGC
CGTCCATTGTCAACGAGGTGCTCAAGAGTGTGGTGGCCAAGTTCAATGCCTCACAGCTGATCACCCAGCGCGCCCAGGTA
TCCCTGTTGATCCGCCGGGAACTGACAGAGAGGGCCAAGGACTTCAGCCTCATCCTGGATGATGTAGCCATCACAGAGCT
GAGCTTTAGCCGAGAGTACACAGCTGCTGTAGAAGCCAAACAAGTGGCCCAACAGGAGGCCCAGCGGGCCCAGTTCTTGG
TAGAAAAAGCAAAGCAGGAACAGCGGCAGAAGATCGTGCAGGCCGAGGGTGAGGCCGAGGCTGCCAAGATGCTTGGAGAA
GCTCTGAGCAAGAACCCTGGCTACATCAAACTTCGCAAGATCCGGGCAGCCCAGAATATCTCCAAGACGATCGCCACATC
ACAGAATCGCATCTATCTCACTGCTGACAACCTTGTGCTGAACCTACAGGATGAAAGTTTCACTCGTGACAGCCTCATCA
AGGGTAAGAAGTGA

Library Parental gene expression (RPM)
SRP051959_spleen 14 .73 RPM
SRP051959_skeletal_muscle 33 .22 RPM
SRP051959_lymph_node 14 .68 RPM
SRP051959_lung 12 .46 RPM
SRP051959_liver 27 .25 RPM
SRP051959_kidney 24 .23 RPM
SRP051959_heart 16 .59 RPM
SRP051959_colon 17 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013760 ortholog_one2many 1 retrogene
retro_amel_1928,
Canis familiaris ENSCAFG00000014439 ortholog_one2many 1 retrogene
retro_cfam_1885,
Homo sapiens ENSG00000215021 ortholog_one2many 1 retrogene
retro_hsap_624,
Gorilla gorilla ENSGGOG00000004281 ortholog_one2many 1 retrogene
retro_ggor_547,
Macaca mulatta ENSMMUG00000010205 ortholog_many2many 2 retrogenes
retro_mmul_2599, retro_mmul_2623,
Nomascus leucogenys ENSNLEG00000005021 ortholog_many2many 2 retrogenes
retro_nleu_121, retro_nleu_450,
Pongo abelii ENSPPYG00000004214 ortholog_one2many 3 retrogenes
retro_pabe_419, retro_pabe_557, retro_pabe_559,
Rattus norvegicus ENSRNOG00000012999 ortholog_one2many 1 retrogene
retro_rnor_2373,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_781 93.36 76.09
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Download FASTA sequences of all ENSCJAG00000007137 retrocopies