Parental gene:

ENSCJAG00000010356

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:1:138397015..138417696(+)


>ENSCJAG00000010356
ATGTCTCTAGTGATCCCTGAAAAGTTCCAGGATATTTTGCGAGTACTCAACACCAACATTGATGGCCGGCGGAAAATAGC
CTTTGCCATCACTACCATTAAGGGCGTGGACCGAAGACACGCTCATGTGGTGTTGAGGAAAGCAGACATTGCCTTCACCA
AGAGGGCAGGAGAACTCACTGAGGATGAGGTGGAACGTGTGATCACCATTATGCAGAATCCACGCCAGTACAAGATCCCA
GACTGGTTCTTGAACAGACAGAAGGATGTAAAGGACGGAAAATATAACCAGTTCCTAGCCAATGGTCTGGACAACAAGCT
CCGTGAAAACCTGGAGCGACTGAAGAAGATTCGGGCCCATAGAGGGCTACACCACTTCTGGGGCCTTCGTGTCCGAGGCC
AGCACACCAAGACCACTGGCCACCGTGGCCGCACCGTGGGTGTATCCAAGAAGAAATAA

Library Parental gene expression (RPM)
SRP051959_spleen 0 .55 RPM
SRP051959_skeletal_muscle 0 .50 RPM
SRP051959_lymph_node 0 .94 RPM
SRP051959_lung 0 .60 RPM
SRP051959_liver 0 .71 RPM
SRP051959_kidney 0 .53 RPM
SRP051959_heart 0 .40 RPM
SRP051959_colon 0 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000021650 within_species_paralog 5 retrogenes
retro_cjac_22, retro_cjac_245, retro_cjac_2529, retro_cjac_2893, retro_cjac_2955,
Loxodonta africana ENSLAFG00000032173 possible_ortholog 1 retrogene
retro_lafr_1171,
Monodelphis domestica ENSMODG00000014210 possible_ortholog 4 retrogenes
retro_mdom_1041, retro_mdom_1286, retro_mdom_1514, retro_mdom_642,
Tarsius syrichta ENSTSYG00000012508 possible_ortholog 8 retrogenes
retro_tsyr_1121, retro_tsyr_1307, retro_tsyr_1627, retro_tsyr_194, retro_tsyr_1949, retro_tsyr_2042, retro_tsyr_575, retro_tsyr_639,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3061 68.63 100.00
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Download FASTA sequences of all ENSCJAG00000010356 retrocopies