Parental gene: | RQCD1, ENSCJAG00000011079 |
| Aliases: | None |
| Description: | RCD1 required for cell differentiation1 homolog (S. pombe) [Source:HGNC Symbol;Acc:10445] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 6:134941038..134966539(+) |
>ENSCJAG00000011079
ATGCACAGCCTGGCGACGGCTGCGCCTGTGCCTACTGCATTGGCACAAGTGGATAGAGAAAAGATCTATCAGTGGATCAA
TGAGCTGTCCAGTCCTGAGACAAGGGAAAATGCTTTGCTGGAGCTAAGTAAGAAGCGAGAATCTGTTCCTGACCTTGCAC
CCATGCTGTGGCATTCATTTGGTACTATTGCAGCACTTTTACAGGAAATTGTAAATATTTATCCTTCTATCAACCCACCC
ACCTTGACAGCACACCAATCTAACAGAGTTTGCAATGCTCTGGCGTTACTGCAATGTGTAGCATCACATCCAGAAACCAG
GTCAGCGTTTCTCGCAGCACACATCCCACTTTTTTTGTACCCCTTTTTGCACACTGTCAGCAAAACACGTCCCTTTGAGT
ATCTTCGACTCACCAGCCTTGGAGTTATTGGGGCCCTGGTGAAAACAGATGAACAAGAAGTAATCAACTTTTTATTGACA
ACAGAAATTATCCCTTTATGTCTGCGAATTATGGAATCTGGAAGTGAACTTTCTAAAACAGTTGCCACATTCATCCTCCA
GAAGATCTTGTTAGATGACACTGGTTTGGCTTATATATGTCAGACATATGAGCGTTTCTCCCATGTTGCCATGATCTTGG
GTAAGATGGTCCTGCAGTTGTCCAAAGAACCTTCTGCCCGTCTGCTGAAGCATGTAGTGAGATGTTACCTTCGACTCTCA
GATAACCCCAGGGCACGTGAAGCACTCAGGCAGTGCCTCCCTGACCAGCTGAAGGACACAACCTTCGCCCAGGTGCTAAA
AGATGACACCACCACGAAACGCTGGCTTGCACAACTGGTGAAGAACCTGCAAGAGGGCCAGGTCACCGATCCCCGGGGTA
TCCCCCTGCCCCCTCAGTGA
ATGCACAGCCTGGCGACGGCTGCGCCTGTGCCTACTGCATTGGCACAAGTGGATAGAGAAAAGATCTATCAGTGGATCAA
TGAGCTGTCCAGTCCTGAGACAAGGGAAAATGCTTTGCTGGAGCTAAGTAAGAAGCGAGAATCTGTTCCTGACCTTGCAC
CCATGCTGTGGCATTCATTTGGTACTATTGCAGCACTTTTACAGGAAATTGTAAATATTTATCCTTCTATCAACCCACCC
ACCTTGACAGCACACCAATCTAACAGAGTTTGCAATGCTCTGGCGTTACTGCAATGTGTAGCATCACATCCAGAAACCAG
GTCAGCGTTTCTCGCAGCACACATCCCACTTTTTTTGTACCCCTTTTTGCACACTGTCAGCAAAACACGTCCCTTTGAGT
ATCTTCGACTCACCAGCCTTGGAGTTATTGGGGCCCTGGTGAAAACAGATGAACAAGAAGTAATCAACTTTTTATTGACA
ACAGAAATTATCCCTTTATGTCTGCGAATTATGGAATCTGGAAGTGAACTTTCTAAAACAGTTGCCACATTCATCCTCCA
GAAGATCTTGTTAGATGACACTGGTTTGGCTTATATATGTCAGACATATGAGCGTTTCTCCCATGTTGCCATGATCTTGG
GTAAGATGGTCCTGCAGTTGTCCAAAGAACCTTCTGCCCGTCTGCTGAAGCATGTAGTGAGATGTTACCTTCGACTCTCA
GATAACCCCAGGGCACGTGAAGCACTCAGGCAGTGCCTCCCTGACCAGCTGAAGGACACAACCTTCGCCCAGGTGCTAAA
AGATGACACCACCACGAAACGCTGGCTTGCACAACTGGTGAAGAACCTGCAAGAGGGCCAGGTCACCGATCCCCGGGGTA
TCCCCCTGCCCCCTCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 6 .68 RPM |
| SRP051959_skeletal_muscle | 5 .28 RPM |
| SRP051959_lymph_node | 7 .44 RPM |
| SRP051959_lung | 6 .98 RPM |
| SRP051959_liver | 3 .77 RPM |
| SRP051959_kidney | 5 .79 RPM |
| SRP051959_heart | 4 .35 RPM |
| SRP051959_colon | 5 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Drosophila melanogaster | FBgn0031047 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2525 | 88.77 | 61.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000011079 retrocopies