Parental gene:

SWAP70, ENSCJAG00000011252

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:73112817..73213094(+)


>ENSCJAG00000011252
ATGGGGAGCCTGAAGGACGAGCTGCTCAAAGCCATCTGGCACGCCTTCACTGCACTCGACCACGACCACAGCGGCAAAGT
CTCCAAGTCGCAGCTCAAGGTCCTTTCCCATAACCTGTGCACAGTGCTGAAGGTTCCTCATGACCCGGTTGCCCTTGAAG
AACACTTCAGGGATGATGATGAGGGGCCAGTGTCCAACCAGGGCTACATGCCTTATTTAAACAAGTTCATTTTGGAAAAG
GTCCAAGACAACTTTGACAAGATTGAATTCAATAGAATGTGTTGGACCCTCTGTGTCAAAAAAAACCTCACAAAGAATCC
CCTGCTCATTACAGAAGAAGATGCATTTAAAGTATGGGTTATTTTCAACTTTTTATCTGAGGACAAGTATCCATTAATTA
TTGTGACAGAAGAGATCGAATACCTGCTTAAGAAGCTTACAGAAGCTATGGGAGGAGGTTGGCAGCAAGAACAATTTGAA
CATTATAAAGTCAACTTTGATGACAGTAAAGATGGTCTTTCTGCATGGGAACTTATCGAGCTTATTGGAAATGGACAGTT
TAGCAAAGGCATGGATCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTTAATGAACTTATATTAGATGTATTAAAAC
AGGGTTACATGATGAAAAAGGGCCACAGACGGAAAAACTGGACTGAACGATGGTTTGTACTAAAACCCAACATAATTTCT
TACTATGTGAGTGAGGATCTGAATGATAAGAAAGGAGACATTCTCTTGGATGAAAATTGCTGTGTAGAGTCCTTGCCTGA
CAAAGATGGAAAGAAATGCCTTTTTCTCGTAAAATGTTTTGATAAGACTTTTGAAATCAGTGCTTCAGATAAGAAGAAGA
AACAGGAGTGGATTCAAGCCATTCATTCTACTATTCATCTGTTGAAGCTGGGCAGCCCTCCACCACACAAAGAAGCTCGA
CAGCGTCGGAAAGAACTCCGGAAGAAGCAACTGGCTGAACAAGAGGAACTGGAGCGACAAATGAAGGAGCTCCAGGCCGC
CAACGAGAGCAAACAGCTGGAGTTGGAGGCCGTGAGGAAGAAACTGGAGGAAGCAGCATCTCGTGCAGCAGAAGAGGAAA
AGAAACGCCTTCAGACTCAAGTGGAACTTCAGGCCAGGTTCAGCACAGAGCTGGAAAGAGAGAAGCTTATCAGACAGCAG
ATGGAAGAGCAGGTTGCCCAAAAGTCCTCTGAACTGGAACAGTATTTACTGCGAGTACGGGAGCTGGAAGACATGTACCT
AAGGCTGCAAGAGGCTCTTGAGGATGAGAGACAGGCCCGGCAAGATGAAGAGACGGTGCGGAAGCTTCAGGCCAGGTTGT
TGGAGGAAGAGTCTTCCAAGAGGGCTGAACTAGAAAAGTGGCACTTGGAGCAGCAGCAGGCCATTCAGATGACTGAGGCA
GAGAAGCAGGAGTTGGAGAATCAGCGTGTCCTGAAGGAACAGGCTCTGCAGGAGGCCATGGAACAGCTGGAGCAGCTGGA
GTTGGAACGGAAACAAGCACTTGAGCAGTACGAGGAAGTTAAAAAGAAGCTGGAGATGGCTACTAATAAGACCAAGAGCT
GGAAGGACAAAGTGGCCCATCATGAAGGATTAATTCGACTGATAGAACCAGGTTCAAAGAACCCTCACCTGATCACTAAC
TGGGGACCTGCAGCTTTCACTGAGGCGGAACTTGAAGAGAGAGAGAAGAACTGGAAAGAGAAGAAGACCACAGAATGA

Library Parental gene expression (RPM)
SRP051959_spleen 30 .29 RPM
SRP051959_skeletal_muscle 8 .21 RPM
SRP051959_lymph_node 13 .72 RPM
SRP051959_lung 14 .71 RPM
SRP051959_liver 9 .29 RPM
SRP051959_kidney 8 .16 RPM
SRP051959_heart 20 .84 RPM
SRP051959_colon 7 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015575 within_species_paralog 2 retrogenes
retro_cjac_10, retro_cjac_313,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1605 87.27 82.74
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Download FASTA sequences of all ENSCJAG00000011252 retrocopies