Parental gene: | ENSCJAG00000021200 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 8:71670799..71687645(+) |
>ENSCJAG00000021200
ATGGCGGCGGCAGCGACTCGAGCGGTTCTGCTACCCGGGGTGCGGCGGCGGTTGTGGGGTTTCAGCGAGAGGCTGCTGAT
CCGAGGTGCTGCAGGACGGTCATCATATTTTGGAGAGAATAGATTGAGGAGTACACAGGCTGCTACACAAGTTGTTCTGA
ATGTTCCTGAAACAAGAGTAACATGTTTAGAAAGTGGACTTAGAGTGGCCTCTGAAGACTCTGGGCTCTCAACATGCACA
GTTGGACTCTGGATTGATGCTGGAAGTAGATATGAAAATGAGAAGAATAATGGAACAGCTCACTTTCTGGAGCATATGGC
TTTCAAGGGCACCAAAAAGAGATCCCAGTTAGATTTGGAACTTGAGATTGAAAACATGGGTGCTCATCTCAATGCCTATA
CCTCCAGAGAGCAGACCGTATACTATGCCAAAGCATTCTCTAAAGACTTGCCAAGAGCTGTAGAAATTCTTGCTGATATC
ATACAAAACAGCACACTGGGAGAAGCAGAGATTGAACGTGAGCGTGGAGTAATCCTTAGAGAGATGCAAGAAGTTGAAAC
CAATTTACAAGAAGTTGTTTTTGATTATCTTCATGCCACAGCTTATCAAAATACTGCACTTGGACGGACAATTTTGGGAC
CAACTGAAAATATCAAATCTATAAGTCGTAAGGACTTAGTGGATTATATAACCACACATTACAAGGGGCCAAGAATAGTT
CTTGCTGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGACTTAGCAAAGTTGCATTTTGGTGACTCTTTATGCACACA
CAAAGGAGAAATACCAGCTCTGCCTCCCTGCAAATTCACAGGAAGTGAGATTCGTATGAGGGATGACAAGATGCCTTTGG
CACACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATATGTCTTATGGTTGCAAACACGCTGATT
GGCAACTGGGATCGCTCTTTTGGAGGAGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCACTTGTCAGGGCAACCTTTG
CCATAGCTTTCAGTCTTTCAACACTTCCTACACAGATACAGGATTATGGGGACTGTATATGGTTTGTGAACCAGCCACCG
TTGGAGACATGCTACATGTTGTTCAGAAAGAATGGATGCGACTCTGTACAAGTGTCACTGAAAGTGAGGTTGCACGAGCC
AGAAATCTTCTGAAAACAAACATGTTGTTGCAGCTTGATGGTTCAACTCCAATTTGTGAAGATATTGGTAGGCAGATGTT
ATGCTATAATAGAAGGATTCCCATCCCTGAGCTTGAAGTAAGAATTGATGCTGTGAATGCTGAGACAATTCGAGAAGTAT
GTACCAAATATATTTATAATAAGAGTCCAGCTATTGCTGCTGTTGGTCCCATTGAGCAACTACCAGATTTTAATCAGATT
TGCAGTAACATGTGTTGGCTTCGTGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 12 .34 RPM |
| SRP051959_heart | 19 .29 RPM |
| SRP051959_kidney | 25 .14 RPM |
| SRP051959_liver | 19 .95 RPM |
| SRP051959_lung | 14 .53 RPM |
| SRP051959_lymph_node | 16 .37 RPM |
| SRP051959_skeletal_muscle | 24 .63 RPM |
| SRP051959_spleen | 14 .73 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000003132 | within_species_paralog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000008798 | ortholog_many2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000012693 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000010699 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_228 | 100.00 | 98.57 | Please wait, loading  |
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Download FASTA sequences of all ENSCJAG00000021200 retrocopies