Parental gene: | ENSCPOG00000005745 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_52:8199711..8207081(-) |
>ENSCPOG00000005745
GTGTGTGCGCCTGCGCAGCGGGCCCTGTGCCCCTCCTCCCCGTCCCCCGGCGGCAGCCCGGGGCCTGCTGAGGGCTCTGC
TGGTGGCGAGAAGTCCGCGGGCGCCGCCGCGGCTGCGGCATCGGCGTCTGCCTCGGCGTCGTCGCCCTCAGGGAGTGGCG
ATGAGGCTCTGGAGCTGCTGGAGCACTGTGGCCTGTGCCGAGAGCGCCTGCTGCCGGAGCGCGAGCCGCGATTGCTGCCC
TGTCTGCACTCGGCCTGCAGTTCCTGTCTCGGGCCCACCGCGCCCGCCGCCGCCAACAACGCGGGGGACGGTCCGGCGGC
GAGTGATAACACCATGGTGGACTGTCCGGTTTGCAAGCAGCAGTGTTCCTCCAAAGACATCGTGGAGAACTACTTTATGC
GCGACAGTGGCAATAAGGCTGCCTCGGACGCACAGGACGCGAACCAGTGTTGCACTAGCTGCGAGGATAATGCCCCAGCC
ACCAGTTATTGTGTAGAGTGTTCTGAACCACTGTGTGAGACCTGTGTGGAGGCTCACCAGCGTGTGAAGTACACTAAGGA
CCACACTGTGCGTTCCACTGGCCCTGCCAAGTCCCGTGATGGTGAGCGCACTGTTTATTGCACTGTGCACAAACATGAAC
CTCTAGTGCTATTCTGTGAGAGCTGCGATACCCTCACCTGTCGAGACTGCCAGCTCAATGCTCACAAGGATCATAAGTAC
CAGTTCCTGGAGGATGCAGTGAGAAACCAGCGCAAGGTCCTAGTCTCAATGGTGAAATGCCTTGGGGACAGACATGCTAC
ACTGCAAAAGAGCACCAAGGAAGTCTGGAGCTCGATCCGCCAGGTGTCTGATGTGCAGAAGCGTGTGCAGGTGGATGTCA
AGATGGCCATCTTGCAGATCATGAAGGAGCTGAACAAGCGGGGCCGTGTGCTGGTCAATGATGCCCAAAAAGTGACTGAA
GGGCAGCAGGAGCGCCTGGAGCGTCAGCACTGGGCCTTGACCAAGATCCAGAAGCATCAGGAACACATTCTGCGGTTTGC
TTCTTGGGCTCTTAAGAGTGACAACAACACAGCGCTGCTGCTTTCTAAGAAACTGATCTACTTCCAGCTGCACAGGGCCC
TCAAGATGATTGTAGACCCTGTAGAGCCTCATGGTGAGATGAAGTTCCAGTGGGACCTCAACGCCTGGACCAAGAGTGCT
GAGGCTTTTGGCAAGATTGTGGCTGAGCGTCCTGGTACCAACTCCACAGGCCCTGCACCTATGGCTCCCCCAAGAGCCCC
AGGACCCCTGAGCAAGCAGGGTTCTAGCAGTAGCCAGCCCATGGAGGTACAGGAAGCCTATGGCTTTGGGTCAGCAGATA
ACCCCTACTCCAGTGCAGAGCCCCATGTGTCTGGCATGAAGCGGTCGCGCTCTGGCGAGGGTGAGGTGAGTGGCCTCATG
CGCAAGGTGCCACGTGTGAGCCTAGAACGTCTGGACCTGGACCTTACAGCTGACAGCCAGCCGCCCGTCTTCAAGGTCTT
TCCGGGCAGCACTACTGAGGACTATAACCTTATTGTTATTGAGCGTGGTGGTGCTGCTGCAGCTGCCGGTCAGCCTGGAA
CTGCACCCCCTGGAGTACCTGGCGCTCCACCCCTCCCTGGCATGGCCATTGTCAAGGAGGAAGAGACAGAGGCTGCCATT
GGAGCCCCTCCTCCTGCTACTGAAGTTCCTGAGACCAAGCCTGTGCTGATGGCTCTAGCTGAGGGCCCTGGCTCTGATGG
CCCCCGCCTAGCTTCACCTAGTGGAAGTACTAGCTCAGGCCTGGAGGTGGTAGCTCCTGAGGCTACCTCGGCCCCAGCTG
GTGGTCCAGGAAACCTAGATGACAGTGCCACCATTTGCCGTGTCTGTCAGAAGCCAGGTGACCTGGTCATGTGCAACCAG
TGCGAGTTTTGCTTCCACCTGGACTGCCACTTGCCTGCTCTGCAGGATGTACCAGGGGAGGAGTGGAGCTGCTCACTCTG
TCATGTACTCCCTGACCTGAAAGAGGAGGATGGCAGCCTAAGCATGGATGGTGCAGATAGTGCTGGTGTGGTAGCCAAGC
TCTCAACAGCCAACCAGCGGAAATGTGAACGCGTCCTCCTGGCTCTCTTTTGCCATGAGCCCTGCCGTCCCCTGCACCAG
TTGGCTACGGACTCTGCTTTTTCCATGGAGCAGCCTGGTGGCACCCTGGACCTGACCCTGATCCGTGCTCGCTTGCAGGA
AAAGCTGTCACCCCCTTATAGCTCCCCCCAGGAGTTTGCCCAGGATGTGGGTCGCATGTTTAAGCAGTTTAACAAGCTAA
CGGAGGACAAGGCAGATGTGCAGTCCATCATCGGCCTGCAGCGTTTCTTCGAGACGCGCATGAATGAGGCCTTCGGTGAC
ACCAAGTTCTCTGCTGTGCTGGTGGAACCCCCGCCTTTGAGCTTGCCCAGTGCTGGTCTAAGTTCCCAGGAGTTGGCTGG
TGGTCTTGGTGATGGTCCCTGA
GTGTGTGCGCCTGCGCAGCGGGCCCTGTGCCCCTCCTCCCCGTCCCCCGGCGGCAGCCCGGGGCCTGCTGAGGGCTCTGC
TGGTGGCGAGAAGTCCGCGGGCGCCGCCGCGGCTGCGGCATCGGCGTCTGCCTCGGCGTCGTCGCCCTCAGGGAGTGGCG
ATGAGGCTCTGGAGCTGCTGGAGCACTGTGGCCTGTGCCGAGAGCGCCTGCTGCCGGAGCGCGAGCCGCGATTGCTGCCC
TGTCTGCACTCGGCCTGCAGTTCCTGTCTCGGGCCCACCGCGCCCGCCGCCGCCAACAACGCGGGGGACGGTCCGGCGGC
GAGTGATAACACCATGGTGGACTGTCCGGTTTGCAAGCAGCAGTGTTCCTCCAAAGACATCGTGGAGAACTACTTTATGC
GCGACAGTGGCAATAAGGCTGCCTCGGACGCACAGGACGCGAACCAGTGTTGCACTAGCTGCGAGGATAATGCCCCAGCC
ACCAGTTATTGTGTAGAGTGTTCTGAACCACTGTGTGAGACCTGTGTGGAGGCTCACCAGCGTGTGAAGTACACTAAGGA
CCACACTGTGCGTTCCACTGGCCCTGCCAAGTCCCGTGATGGTGAGCGCACTGTTTATTGCACTGTGCACAAACATGAAC
CTCTAGTGCTATTCTGTGAGAGCTGCGATACCCTCACCTGTCGAGACTGCCAGCTCAATGCTCACAAGGATCATAAGTAC
CAGTTCCTGGAGGATGCAGTGAGAAACCAGCGCAAGGTCCTAGTCTCAATGGTGAAATGCCTTGGGGACAGACATGCTAC
ACTGCAAAAGAGCACCAAGGAAGTCTGGAGCTCGATCCGCCAGGTGTCTGATGTGCAGAAGCGTGTGCAGGTGGATGTCA
AGATGGCCATCTTGCAGATCATGAAGGAGCTGAACAAGCGGGGCCGTGTGCTGGTCAATGATGCCCAAAAAGTGACTGAA
GGGCAGCAGGAGCGCCTGGAGCGTCAGCACTGGGCCTTGACCAAGATCCAGAAGCATCAGGAACACATTCTGCGGTTTGC
TTCTTGGGCTCTTAAGAGTGACAACAACACAGCGCTGCTGCTTTCTAAGAAACTGATCTACTTCCAGCTGCACAGGGCCC
TCAAGATGATTGTAGACCCTGTAGAGCCTCATGGTGAGATGAAGTTCCAGTGGGACCTCAACGCCTGGACCAAGAGTGCT
GAGGCTTTTGGCAAGATTGTGGCTGAGCGTCCTGGTACCAACTCCACAGGCCCTGCACCTATGGCTCCCCCAAGAGCCCC
AGGACCCCTGAGCAAGCAGGGTTCTAGCAGTAGCCAGCCCATGGAGGTACAGGAAGCCTATGGCTTTGGGTCAGCAGATA
ACCCCTACTCCAGTGCAGAGCCCCATGTGTCTGGCATGAAGCGGTCGCGCTCTGGCGAGGGTGAGGTGAGTGGCCTCATG
CGCAAGGTGCCACGTGTGAGCCTAGAACGTCTGGACCTGGACCTTACAGCTGACAGCCAGCCGCCCGTCTTCAAGGTCTT
TCCGGGCAGCACTACTGAGGACTATAACCTTATTGTTATTGAGCGTGGTGGTGCTGCTGCAGCTGCCGGTCAGCCTGGAA
CTGCACCCCCTGGAGTACCTGGCGCTCCACCCCTCCCTGGCATGGCCATTGTCAAGGAGGAAGAGACAGAGGCTGCCATT
GGAGCCCCTCCTCCTGCTACTGAAGTTCCTGAGACCAAGCCTGTGCTGATGGCTCTAGCTGAGGGCCCTGGCTCTGATGG
CCCCCGCCTAGCTTCACCTAGTGGAAGTACTAGCTCAGGCCTGGAGGTGGTAGCTCCTGAGGCTACCTCGGCCCCAGCTG
GTGGTCCAGGAAACCTAGATGACAGTGCCACCATTTGCCGTGTCTGTCAGAAGCCAGGTGACCTGGTCATGTGCAACCAG
TGCGAGTTTTGCTTCCACCTGGACTGCCACTTGCCTGCTCTGCAGGATGTACCAGGGGAGGAGTGGAGCTGCTCACTCTG
TCATGTACTCCCTGACCTGAAAGAGGAGGATGGCAGCCTAAGCATGGATGGTGCAGATAGTGCTGGTGTGGTAGCCAAGC
TCTCAACAGCCAACCAGCGGAAATGTGAACGCGTCCTCCTGGCTCTCTTTTGCCATGAGCCCTGCCGTCCCCTGCACCAG
TTGGCTACGGACTCTGCTTTTTCCATGGAGCAGCCTGGTGGCACCCTGGACCTGACCCTGATCCGTGCTCGCTTGCAGGA
AAAGCTGTCACCCCCTTATAGCTCCCCCCAGGAGTTTGCCCAGGATGTGGGTCGCATGTTTAAGCAGTTTAACAAGCTAA
CGGAGGACAAGGCAGATGTGCAGTCCATCATCGGCCTGCAGCGTTTCTTCGAGACGCGCATGAATGAGGCCTTCGGTGAC
ACCAAGTTCTCTGCTGTGCTGGTGGAACCCCCGCCTTTGAGCTTGCCCAGTGCTGGTCTAAGTTCCCAGGAGTTGGCTGG
TGGTCTTGGTGATGGTCCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 47 .14 RPM |
| SRP017611_kidney | 90 .35 RPM |
| SRP017611_brain | 81 .33 RPM |
| SRP040447_lung | 131 .85 RPM |
| SRP040447_skeletal_muscle | 76 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Procavia capensis | ENSPCAG00000007149 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_84 | 84.57 | 67.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000005745 retrocopies