Parental gene: | HSF2, ENSCPOG00000007509 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_1:77907533..77933732(-) |
>ENSCPOG00000007509
ATGAAGCAGAGTTCCAACGTGCCAGCCTTCCTCAGCAAGCTGTGGACGCTGGTGGAGGAAGCCCACACCAACGAGTTCAT
CACCTGGAGCCAGAATGGTCAGAGTTTTTTGGTCTTGGATGAACAGAGATTTGCAAAAGAAATTCTTCCCAAGTACTTCA
AGCACAATAACATGGCAAGCTTTGTGAGGCAGCTGAACATGTATGGTTTCCGTAAAGTAGTGCACATCGACTCTGGAATT
GTAAAGCAGGAAAGAGATGGTCCCGTTGAATTTCAGCACCCTTACTTCAAACAAGGCCAGGATGACTTGTTGGAGAACAT
TAAAAGGAAGGTTTCATCTTCAAAACCAGAAGATAATAAAATTCGTCAGGAAGATTTAACAAAAATTATAAGTAGTGCTC
AGAAGGTTCAGATAAAGCAAGAAACTATTGAGTCCAGGCTTTCAGAACTAAAAAGAAACTGTAGTGAGAACGAGTCCCTC
TGGAAGGAGGTATCAGAACTAAGAGCGAAGCATGCGCAGCAGCAGCAGGTCATCCGAAAGATTGTCCAGTTTATTGTTAC
ACTGGTTCAGAATAACCAGCTTGTGAGCTTAAAACGTAAGAGGCCTCTACTTCTAAACACTAATGGAGCCCAAAAGAAGA
ATCTGTTTCAACATATCGTCAAAGAACCAGCTGATAATCACCACCACAAAGTCCCACATAGTAGGACTGAAGGTTTAAAG
CAAAGGGAGCGGGTTTCAGATGACATCATCATTTATGACATCACTGATGATAATGCAGATGAGGAAAATATCCCAGTTAT
TCCGGAAACAAATGAGGATGTTATATCTGATCCCTCCAACCAGTACCCTGACATTGTCATTGTTGAGGACGACAATGAGG
ATGAATACGCACCTGTCATTCAGAGCAGCGAGCCGACAGACTCGACCAGAGAGTCCCCGAGTCCAGGCGGTGATGGCAGC
AGCCCTCTCATGTCCAGTGCTGTCCAGCTAAATGGGTCCTCCAGTCTGACCACGGAAGACCCTGTGACCATGATGGACTC
CATTCTCAATGACAACATTAACCTTCTGGGAAAGGTCGAGCTGCTGGACTACCTCGACAGTATCGACTGCAGCCTGGAAG
ACTTCCAAGCCATGCTGTCGGGCAGACAGTTTAGCATCGACCCGGACCTCCTCGTTGATCTTTTCACTAGTTCTGTGCAG
ATGAATCCCACAGATTACATCAATAATACAAAATCTGAGAATAAAGTACTGGAAGCTACCAAGAATAATGTTGTTCAGCC
AGTTTCTGAAGAAGGAAGAAAATCGAAGACCAAACCAGACAAGCAGCTCATCCAGTACACGGCATTCCCCCTGCTGGCCT
TCCTCGATGGGAACCCCGCATCCGCCGTGGAGCAGGGGAGCATGACAGGCCCGGCAGAGGCTGTGTCCTCTGCAGATAAA
CCCATAGAAGTGGATGAGCTCTTGGAGAGCAGCCTGGACCAGGAACCAACCCAGAGTAAGCTCGTGCGCTTGGAGCCATT
GACTGAGGCGGAAGCCAGCGAGGCCACCCTGTTCTATTTATGTGAACTGGCTCCGGCGCCGCTGGATAGTGACATGCCCC
TCCTAGATAGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 19 .04 RPM |
| SRP017611_kidney | 10 .47 RPM |
| SRP017611_liver | 5 .75 RPM |
| SRP040447_lung | 15 .79 RPM |
| SRP040447_skeletal_muscle | 29 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000010951 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007910 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013569 | ortholog_one2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1341 | 81.31 | 56.05 | Please wait, loading  |
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Download FASTA sequences of all ENSCPOG00000007509 retrocopies