Parental gene: | UGP2, ENSCPOG00000008459 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_48:1442965..1479498(-) |
>ENSCPOG00000008459
CCTTCGTATTTTATTGAAGATCTTAGCAAAGCAATGTCTCAAGATGGCGCTTCTCAATTCCAAGAAGTCATTAGACAAGA
GCTAGAATTATCTGTGAAGAAGGAATTAGAAAAAATACTTACCACAGCACCCTCACATGAATTTGAGCACACTAAAAAAG
ATCTTGATGGATTTCGGAAGCTATTTCATAGATTTTTGCAAGAAAAGGGACCTTCTGTGGATTGGGGGAAAATTCAGAGA
CCTCCAGAAGATTCGATTCAGCCATATGAAAAGATAAAGGCCAGGGGCTTGCCTGATAATATATCTTCTGTGTTGAACAA
GCTAGTTGTGGTGAAACTCAATGGTGGTTTGGGAACCAGCATGGGCTGCAAAGGTCCTAAAAGCCTAATTGGTGTGAGGA
ATGAGAATACCTTTTTGGATCTGACTGTTCAACAAATTGAACATTTGAACAAAACCTACAATACAGATGTTCCGCTTGTT
TTAATGAATTCTTTTAACACGGATGAAGATACCAAAAAAATACTACAGAAGTACAATCATTGTCGTGTGAAAATCTACAC
TTTCAATCAAAGCAGGTACCCAAGGATTAATAAAGAATCTTTACTTCCTGTAGCAAAGGATGTATCTTACTCAGGGGAAA
ACACAGAAGCTTGGTACCCTCCAGGTCATGGTGATATCTACGCTAGTTTCTACAACTCTGGTTTGCTTGACACCTTTATA
GCAGAAGGCAAAGAATATATTTTTGTGTCTAACATTGATAATCTGGGTGCCACAGTGGATCTTTATATTCTTAATCATCT
AATGAACCCACCCAATGGAAAACGCTGTGAATTTGTTATGGAAGTCACAAATAAAACACGTGCAGATGTAAAGGGTGGGA
CACTCACTCAGTATGAAGGAAAACTGAGACTGGTGGAAATCGCTCAGGTGCCAAAAGCACACGTCGATGAGTTCAAGTCT
GTATCAAAATTTAAAATATTTAACACAAACAACCTATGGATTTCTCTTGCAGCAGTTAAAAGATTGCAGGAACAGAATGC
CATTGACATGGAAATCATTGTAAATCCAAAGACTTTGGATGGAGGCCTGAATGTCATTCAGTTAGAAACTGCAGTAGGGG
CTGCAATTAAAAGTTTTGAGAATTCCTTAGGTATTAATGTTCCAAGAAGCCGTTTTCTTCCTGTAAAAACCACATCAGAT
CTCTTGCTTGTGATGTCAAACCTCTACAGCCTTAATGCAGGATCTCTGACGATGAGTGAAAAGCGGGAATTTCCTACAGT
ACCCTTGGTTAAATTAGGCAGTTCATTTACAAAGGTTCAAGATTATCTAAGAAGATTTGAAAGTATACCAGATATGCTTG
AATTGGATCACCTCACAGTTTCAGGAGATGTGACATTTGGCAAAAATGTTTCATTAAAGGGAACAGTTATCATCATTGCA
AATCATGGTGACAGAATTGACATCCCACCTGGAGCAGTATTAGAGAACAAAATTGTATCTGGAAACCTTCGCATCTTGGA
CCACTGA
CCTTCGTATTTTATTGAAGATCTTAGCAAAGCAATGTCTCAAGATGGCGCTTCTCAATTCCAAGAAGTCATTAGACAAGA
GCTAGAATTATCTGTGAAGAAGGAATTAGAAAAAATACTTACCACAGCACCCTCACATGAATTTGAGCACACTAAAAAAG
ATCTTGATGGATTTCGGAAGCTATTTCATAGATTTTTGCAAGAAAAGGGACCTTCTGTGGATTGGGGGAAAATTCAGAGA
CCTCCAGAAGATTCGATTCAGCCATATGAAAAGATAAAGGCCAGGGGCTTGCCTGATAATATATCTTCTGTGTTGAACAA
GCTAGTTGTGGTGAAACTCAATGGTGGTTTGGGAACCAGCATGGGCTGCAAAGGTCCTAAAAGCCTAATTGGTGTGAGGA
ATGAGAATACCTTTTTGGATCTGACTGTTCAACAAATTGAACATTTGAACAAAACCTACAATACAGATGTTCCGCTTGTT
TTAATGAATTCTTTTAACACGGATGAAGATACCAAAAAAATACTACAGAAGTACAATCATTGTCGTGTGAAAATCTACAC
TTTCAATCAAAGCAGGTACCCAAGGATTAATAAAGAATCTTTACTTCCTGTAGCAAAGGATGTATCTTACTCAGGGGAAA
ACACAGAAGCTTGGTACCCTCCAGGTCATGGTGATATCTACGCTAGTTTCTACAACTCTGGTTTGCTTGACACCTTTATA
GCAGAAGGCAAAGAATATATTTTTGTGTCTAACATTGATAATCTGGGTGCCACAGTGGATCTTTATATTCTTAATCATCT
AATGAACCCACCCAATGGAAAACGCTGTGAATTTGTTATGGAAGTCACAAATAAAACACGTGCAGATGTAAAGGGTGGGA
CACTCACTCAGTATGAAGGAAAACTGAGACTGGTGGAAATCGCTCAGGTGCCAAAAGCACACGTCGATGAGTTCAAGTCT
GTATCAAAATTTAAAATATTTAACACAAACAACCTATGGATTTCTCTTGCAGCAGTTAAAAGATTGCAGGAACAGAATGC
CATTGACATGGAAATCATTGTAAATCCAAAGACTTTGGATGGAGGCCTGAATGTCATTCAGTTAGAAACTGCAGTAGGGG
CTGCAATTAAAAGTTTTGAGAATTCCTTAGGTATTAATGTTCCAAGAAGCCGTTTTCTTCCTGTAAAAACCACATCAGAT
CTCTTGCTTGTGATGTCAAACCTCTACAGCCTTAATGCAGGATCTCTGACGATGAGTGAAAAGCGGGAATTTCCTACAGT
ACCCTTGGTTAAATTAGGCAGTTCATTTACAAAGGTTCAAGATTATCTAAGAAGATTTGAAAGTATACCAGATATGCTTG
AATTGGATCACCTCACAGTTTCAGGAGATGTGACATTTGGCAAAAATGTTTCATTAAAGGGAACAGTTATCATCATTGCA
AATCATGGTGACAGAATTGACATCCCACCTGGAGCAGTATTAGAGAACAAAATTGTATCTGGAAACCTTCGCATCTTGGA
CCACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 265 .77 RPM |
| SRP017611_kidney | 120 .08 RPM |
| SRP017611_brain | 47 .51 RPM |
| SRP040447_lung | 51 .40 RPM |
| SRP040447_skeletal_muscle | 150 .91 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006960 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000006509 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002137 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000000694 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_811 | 67.53 | 52.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000008459 retrocopies