Parental gene: | IKZF5, ENSCPOG00000021914 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_1:44891647..44896301(+) |
>ENSCPOG00000021914
ATGGGTGAAAAGAAACCAGAACCTCTGGACTTCGTGAAAGATTTTCAGGAATACCTGACTCAGCAGACCCATCATGTGAA
CATGATTTCTGGATCAGTTAGTGGGGACAAAGAAGCAGAGGCTCTTCAGGGAGCTGGAACAGATGGTGATCAAAATGGAC
TTGATCATCCATCTGTTGAAGTTTCCCTGGATGAAAACTCAGGAATGTTAGTAGACGGGTTTGAAAGGACTTTTGATGGG
AAGCTCAAGTGTCGGTACTGCAACTACGCCAGCAAAGGAACAGCACGGCTTATCGAGCACATCAGAATCCACACAGGTGA
AAAACCTCATAGATGTCACTTATGTCCATTTGCATCTGCTTATGAGCGTCATCTGGAAGCCCATATGCGTTCCCATACTG
GAGAAAAACCATACAAATGTGAATTATGTTCCTTCCGCTGCAGTGATCGAAGTAACTTGTCCCACCATCGAAGGCGCAAG
CATAAAATGGTGCCAATTAAAGGTACTCGGTCTTCCTTGAGCAGCAAGAAAATGTGGGGGGTTTTACAGAAGAAAACGAG
CAATCTGGGCTACAGCAGAAGAGCACTGATCAACTTAAGCCCACCTTCCATGGTGGTTCAGAAACCAGACTACCTTAATG
ATTTTACCCACGAGATCCCAAATATCCAGACTGACTCCTATGAAAGTATAGCGAAAACTACACCGGCTGGTGGCCTACCA
AGGGACCCGCAAGAACTCATGGTTGACAACCCTTTAAATCAGCTCTCAACGCTAGCAGGACAGCTGTCCAGTTTGCCACC
TGAAAACCAAAACCCTGCATCCCCTGATGTAGTCCCCTGCCCTGATGAAAAGCCTTTCATGATTCAGCAGCCCTCTGCCC
AAGCAGTAGTCTCTACTGTGTCAGCAAGTATTCCTCAGAGCTCCCCGACAAGCCCCGAGCCTCGGCCATCACACAGTCAG
AGGAACTACAGCCCAGTAGCAGGTCCAAGCAGTGAACCAAGTGCCCACACCAGTACTCCCAGCATAGGAAACAGCCAACC
CAGCACTCCAGCCCCAACCCTGCCAATCCAGGACCCTCAGCTTCTGCACCACTGCCAGCACTGTGACATGTACTTCGCAG
ACAATATCCTTTACACGATTCATATGGGATGTCACGGCTATGAAAATCCTTTTCAGTGTAATATATGTGGATGCAAATGT
AAAAACAAGTATGATTTTGCCTGCCATTTTGCAAGAGGGCAACATAATCAACACTGA
ATGGGTGAAAAGAAACCAGAACCTCTGGACTTCGTGAAAGATTTTCAGGAATACCTGACTCAGCAGACCCATCATGTGAA
CATGATTTCTGGATCAGTTAGTGGGGACAAAGAAGCAGAGGCTCTTCAGGGAGCTGGAACAGATGGTGATCAAAATGGAC
TTGATCATCCATCTGTTGAAGTTTCCCTGGATGAAAACTCAGGAATGTTAGTAGACGGGTTTGAAAGGACTTTTGATGGG
AAGCTCAAGTGTCGGTACTGCAACTACGCCAGCAAAGGAACAGCACGGCTTATCGAGCACATCAGAATCCACACAGGTGA
AAAACCTCATAGATGTCACTTATGTCCATTTGCATCTGCTTATGAGCGTCATCTGGAAGCCCATATGCGTTCCCATACTG
GAGAAAAACCATACAAATGTGAATTATGTTCCTTCCGCTGCAGTGATCGAAGTAACTTGTCCCACCATCGAAGGCGCAAG
CATAAAATGGTGCCAATTAAAGGTACTCGGTCTTCCTTGAGCAGCAAGAAAATGTGGGGGGTTTTACAGAAGAAAACGAG
CAATCTGGGCTACAGCAGAAGAGCACTGATCAACTTAAGCCCACCTTCCATGGTGGTTCAGAAACCAGACTACCTTAATG
ATTTTACCCACGAGATCCCAAATATCCAGACTGACTCCTATGAAAGTATAGCGAAAACTACACCGGCTGGTGGCCTACCA
AGGGACCCGCAAGAACTCATGGTTGACAACCCTTTAAATCAGCTCTCAACGCTAGCAGGACAGCTGTCCAGTTTGCCACC
TGAAAACCAAAACCCTGCATCCCCTGATGTAGTCCCCTGCCCTGATGAAAAGCCTTTCATGATTCAGCAGCCCTCTGCCC
AAGCAGTAGTCTCTACTGTGTCAGCAAGTATTCCTCAGAGCTCCCCGACAAGCCCCGAGCCTCGGCCATCACACAGTCAG
AGGAACTACAGCCCAGTAGCAGGTCCAAGCAGTGAACCAAGTGCCCACACCAGTACTCCCAGCATAGGAAACAGCCAACC
CAGCACTCCAGCCCCAACCCTGCCAATCCAGGACCCTCAGCTTCTGCACCACTGCCAGCACTGTGACATGTACTTCGCAG
ACAATATCCTTTACACGATTCATATGGGATGTCACGGCTATGAAAATCCTTTTCAGTGTAATATATGTGGATGCAAATGT
AAAAACAAGTATGATTTTGCCTGCCATTTTGCAAGAGGGCAACATAATCAACACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 7 .92 RPM |
| SRP017611_kidney | 15 .07 RPM |
| SRP017611_brain | 12 .48 RPM |
| SRP040447_lung | 14 .05 RPM |
| SRP040447_skeletal_muscle | 8 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000023847 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000005792 | within_species_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000040167 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013340 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_3 | 80.23 | 61.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000021914 retrocopies