Parental gene: | CSA.10126, ENSCSAVG00000008457 |
| Aliases: | None |
| Description: | None |
| Organism: | Pacific transparent sea squirt (Ciona savignyi) |
| Coordinates: | reftig_30:2373288..2378113(+) |
>ENSCSAVG00000008457
AACACTTATTTAATTCTCTTTCTGTTTCTCAATTTTTACATAGGATTTTTGGAGATCAAACTGCATAAGCAGAAAACCCT
CCGACAAATTATGAAGGAAAAGGGAACAAAGGCTTTTAAGTACACTCCATCTTTTGGAAGGTCAACATCGAATGAGCCGT
TAACTAACTATTTGGACGCGCAATACTTCGGGGAGATTGCCATCGGTACACCAGAGCAAAAATTCACCGTAATATTCGAT
ACCGGTTCTTCCAATTTGTGGATACCATCAGCCACTTGTCCATCAAACAACTATGCTTGTTTGCTCCACAATAAGTACGA
TTCCACTGCATCATCAACCTACGTTGCTGACGGCGATAACTTCGCAATTCAGTATGGTACCGGTTCCATGGTCGGATTCG
AAAGCGTGGACACCATCGCAGGCATTCCATCAACCAACCAAGTTTTTGCTGAGGCAACCGAAGAGCCAGGCATTACCTTT
GTTGCTGCTAAATTTGATGGCATCCTTGGTATGGGCTACCCCACTATCTCCGTTAACGGAATTAAGCCCGTGTTCAACCA
AATGTACGAACAAGGAGCCGTTGACAAGAACCAATTCGCATTTTATCTTAACAGAGACCCGACCGGTGAAGAAGGCGGGG
AAATATGTTTAGGTGGAGTCAACGAAGCAAGATACACCGGCGAATTTAACTACCACTCAGTCACCAGAAAGGGATACTGG
CAATTGAAAATGGATAGCGTGGCTGTAGCAGATGCCGATGCCACTGCAGCGTGCGTTGGTGGATGCCAAATCATCGTCGA
TTCAGGCACCTCACTGATAACTGGACCAACAGTCGATACCGATGCCATCAATCACGCAATTGGAGCTATTAGATTCGTCC
AAGGCGAGTACCTGGTCATTTGCCGCAACATTCCAAACATGCCTGATATAACCTTCGTATTGGATGGCATTGAATATGTG
TTGACACCCGATGATTACATAACACAAGATGGAGTGACTCAGTGCTTATCTGCCTTCATGGGAATGGATATTCCTGAACC
AACAGGTCCATTGTGGATTCTTGGTGACGCCTTCATGGGCAAGTATTATACCAGCTTCGACTTTGACACTGATCAAGTTG
GATTTGCC
AACACTTATTTAATTCTCTTTCTGTTTCTCAATTTTTACATAGGATTTTTGGAGATCAAACTGCATAAGCAGAAAACCCT
CCGACAAATTATGAAGGAAAAGGGAACAAAGGCTTTTAAGTACACTCCATCTTTTGGAAGGTCAACATCGAATGAGCCGT
TAACTAACTATTTGGACGCGCAATACTTCGGGGAGATTGCCATCGGTACACCAGAGCAAAAATTCACCGTAATATTCGAT
ACCGGTTCTTCCAATTTGTGGATACCATCAGCCACTTGTCCATCAAACAACTATGCTTGTTTGCTCCACAATAAGTACGA
TTCCACTGCATCATCAACCTACGTTGCTGACGGCGATAACTTCGCAATTCAGTATGGTACCGGTTCCATGGTCGGATTCG
AAAGCGTGGACACCATCGCAGGCATTCCATCAACCAACCAAGTTTTTGCTGAGGCAACCGAAGAGCCAGGCATTACCTTT
GTTGCTGCTAAATTTGATGGCATCCTTGGTATGGGCTACCCCACTATCTCCGTTAACGGAATTAAGCCCGTGTTCAACCA
AATGTACGAACAAGGAGCCGTTGACAAGAACCAATTCGCATTTTATCTTAACAGAGACCCGACCGGTGAAGAAGGCGGGG
AAATATGTTTAGGTGGAGTCAACGAAGCAAGATACACCGGCGAATTTAACTACCACTCAGTCACCAGAAAGGGATACTGG
CAATTGAAAATGGATAGCGTGGCTGTAGCAGATGCCGATGCCACTGCAGCGTGCGTTGGTGGATGCCAAATCATCGTCGA
TTCAGGCACCTCACTGATAACTGGACCAACAGTCGATACCGATGCCATCAATCACGCAATTGGAGCTATTAGATTCGTCC
AAGGCGAGTACCTGGTCATTTGCCGCAACATTCCAAACATGCCTGATATAACCTTCGTATTGGATGGCATTGAATATGTG
TTGACACCCGATGATTACATAACACAAGATGGAGTGACTCAGTGCTTATCTGCCTTCATGGGAATGGATATTCCTGAACC
AACAGGTCCATTGTGGATTCTTGGTGACGCCTTCATGGGCAAGTATTATACCAGCTTCGACTTTGACACTGATCAAGTTG
GATTTGCC
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000010157 | possible_ortholog | 1 retrogene | |
| Ciona intestinalis | ENSCING00000005258 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_csav_8 | 64.24 | 92.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCSAVG00000008457 retrocopies