Parental gene:

ENSDNOG00000006037

Aliases:None
Description:None
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_4955:22267..97687(+)


>ENSDNOG00000006037
ATGATCCTGTTGGAGGTGGACAACCGCATCATCGAGGAGACGCTCGCGCTCAAGTTCGAGAACGCGGCCGCTGGAAACAA
ACCAGAAGCAGTAGAAGTAACATTTGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTAAAGAGGGTGTAC
GGGAGTTTCTTGGTAAATCCAGAATCAGGTTACAATGTCTCTTTGCTTTATGACCTTGAAAATCTCCCTGCATCCAAGGA
TTCAATTGTACATCAGGCTGGCATGTTGAAACGAAACTGTTTTGCCTCTGTCTTTGAGAAGTACTTCCAATTTCAAGAAG
AGGGCAAGGAAGGCGAGAACAGGGCAGTTATCCATTATAGGGATGATGAAACCATGTACGTTGAGTCCAAAAAGGACAGA
GTCACAGTAGTCTTCAGCACAGTGTTTAAAGATGATGACGATGTGGTCATTGGAAAGGTGTTTATGCAGGAGTTCAAAGA
AGGACGCAGAGTTAGCCACACAGCCCCACAGGTCCTCTTCAGCCACAGGGAACCGCCTCTGGAGCTGAAAGACACAGATG
CTGCCGTGGGCGACANNNNNNNNNNNNNNNNNNNNNTGCTGTTCCCTCGCCACACCAACGCCAGTGCCCGAGACAACACC
ATCAACCTGATCCACACCTTTAGAGACTACCTGCACTACCATATCAAGTGCTCAAAGGCCTATATTCACACACGTATGCG
GGCAAAAACATCTGACTTCCTTAAGGTGCTGAACCGTGCACGCCCGGATGCTGAGAAAAAAGAAATGAAAACAATCACNN
NNNNNNNNNNNNNNNCCCGCTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 84 .01 RPM
SRP012922_cerebellum 27 .63 RPM
SRP012922_heart 21 .11 RPM
SRP012922_kidney 39 .70 RPM
SRP012922_liver 24 .00 RPM
SRP012922_lung 52 .08 RPM
SRP012922_quadricep_muscle 19 .56 RPM
SRP012922_spleen 89 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003197 ortholog_many2many 2 retrogenes
retro_amel_1771, retro_amel_1846,
Canis familiaris ENSCAFG00000014618 ortholog_one2many 1 retrogene
retro_cfam_513,
Choloepus hoffmanni ENSCHOG00000010564 ortholog_one2many 5 retrogenes
retro_chof_1845, retro_chof_2103, retro_chof_2226, retro_chof_2227, retro_chof_473,
Dipodomys ordii ENSDORG00000016107 ortholog_one2many 1 retrogene
retro_dord_624,
Felis catus ENSFCAG00000002370 ortholog_many2many 1 retrogene
retro_fcat_732,
Loxodonta africana ENSLAFG00000007414 ortholog_one2many 1 retrogene
retro_lafr_593,
Myotis lucifugus ENSMLUG00000004161 ortholog_many2many 1 retrogene
retro_mluc_390,
Mustela putorius furo ENSMPUG00000016512 ortholog_many2many 1 retrogene
retro_mputfur_1294,
Mus musculus ENSMUSG00000006304 ortholog_one2many 1 retrogene
retro_mmus_1556,
Oryctolagus cuniculus ENSOCUG00000005516 ortholog_one2many 1 retrogene
retro_ocun_483,
Pteropus vampyrus ENSPVAG00000017133 ortholog_one2many 1 retrogene
retro_pvam_1216,
Sorex araneus ENSSARG00000003326 ortholog_one2many 1 retrogene
retro_sara_283,
Tarsius syrichta ENSTSYG00000001037 ortholog_one2many 1 retrogene
retro_tsyr_557,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_5 94.58 67.67
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Download FASTA sequences of all ENSDNOG00000006037 retrocopies