Parental gene: | TRIM24, ENSDNOG00000006533 |
| Aliases: | None |
| Description: | tripartite motif containing 24 [Source:HGNC Symbol;Acc:11812] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2487:17..93977(+) |
>ENSDNOG00000006533
GCAGAAAGTGACATCATAGATAATTTATTTGTGAAGGACTCTAGTGACATTCTCATCAGTACAGTAAGGAAGTCAGAAGA
TGATGTATGTACAAGCTGTGAAGACAATGCAGAAGCTAATGGGTTTTGTGTAGAGTGTGTTGAATGGCTCTGCAAAACTT
GCATCAGAGCTCATCAGAGGGTGAAGTTCACAAAAGACCATACTGTAAGACAAAAAGAAGAAGTATCTCCAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAATAATTGAAGTAAATCAAAATCAAAAGCAAGTGGAACAGGATATTAAAGTTGCTATATTTACACTGATGGTAGAAAT
AAATAAAAAAGGAAAAGCTCTACTGCATCAGCTAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNATTACATATCGATTACGGCACCTCCTTCGAGCAAGGTGTGATGCCTCCCCAGCAAC
CAACAATACCATTCAATTTCATTGTGATCCTGGTTTTTGGGCTCAAAATATTATCAATTTAGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCCACCCCCTCCACATATGTCACATTTTAAAAATCATAGACCCAAACTCAATGGATTAATTCTTCTTTCT
CATCCTCATCTGAGATCACCAAACCAGAATATACCACAAGTAATAGAGCCTAGCCCCTTATGGATGTCTTTTGTGGCTCA
GCAAGACATAACACAGTGGATCAGCAATAGAACTGCCCCATCAACAACCTCCTGTCCTCCTATTCTCACCATTACTAGTA
TGGTACGATATGACAAGGACTTTGGTTCACCTATGATCAATCTGAGCTCACCAGTGGAAAGTTCATATATTCTCTCTTCA
CTTTTAGATNNNNNNTGTTCAAGTACTATTATGCTGGACAATATTGTGAGGAAGGATACTAGCTTAGATCATGGCCAGCC
AAGACCACCCTCAAACAGAACTGTCCAGTCACCAAATTCATCAGTGCCATCTCCAGGCCTTGCAGGACCTGTGACTCTGA
CTAGTGTACATCCCCCAATACGTTCACCTAGTGCCTCCAGCGTTGGGAGCCGAGGAAGCTCTGGCTCTTCTAGCAAACCA
ACAGGGGCTGATTCTACACACAAAGTCCCAGTGGTCATGTTGGAACCCATCCGAATAAAACAAGAAAACAGTGGACCACC
AGAAAATTATGATTTTCCTGTTGTTATAGTGAAACAAGAATCAGATGAAGAATCTAGACCTCAAAATACGAATTATCCAA
GAAGCATACTCACTTCCCTGCTCTTAAATAGCAATCAGGGCTCTACTTCTGAGGAGACTGTGTTAAGATCAGATGCTCCA
GATAGCACAGGCGATCAACCTGGACTTCACCAGGAAAATTCCTCAAATGGAAAGTCTGAGTGGCTAGATGCTTCCCAGAA
GTCACCACTTCATGTTGGAGAGACAAGAAAAGAGGATGACCCCAATGAAGACTGGTGTGCAGTTTGTCAGAATGGAGGGG
AACTCTTGTGCTGTGAAAAATGTCCCAAAGTATTCCATCTTTCTTGTCATGTGCCCACATTGACAAATTTTCCAAGTGGA
GAGTGGATTTGCACTTTCTGCCGAGACTTATCTAAACCAGAAGTTGAATATGATTGTGATGCTCCCACTCACAACTCAGA
AAAAAAGAAAACTGAAGGCCTTTTTAAATTAACACCAATAGATAAAAGGAAGTGTGAACGGCTACTTTTATTTTATTGCC
ATGAAATGAGCCTGGCTTTTCAAGACCCAGTTCCTCTAACTGTGCCTGATTATTACAAAATAATTAAAAATCCAATGGAC
TTGTCAACCATCAAGAAAAGACTACAAGAAGATTATTCCATGTATACAAAGCCTGAAGACTTTGTAGCTGATTTTAGATT
GATCTTTCAAAATTGTGCTGAATTCAATGAGCCTGATTCAGAAGTAGCCAATGCTGGTATAAAACTTGAAAACTATTTTG
AAGAACTTCTAAAGAATCTTTATCCAGAAAAAAGGTTTCCTAAACTAGAATTCAGGAATGAATCAGAAGATAATAAATTT
AGTGACGATTCAGATGATGACTTTGTACAGCCCCGGAAAAAACGTGTCAAAAGCATTGAGGAACGCCAGCTGCTTAAATA
A
GCAGAAAGTGACATCATAGATAATTTATTTGTGAAGGACTCTAGTGACATTCTCATCAGTACAGTAAGGAAGTCAGAAGA
TGATGTATGTACAAGCTGTGAAGACAATGCAGAAGCTAATGGGTTTTGTGTAGAGTGTGTTGAATGGCTCTGCAAAACTT
GCATCAGAGCTCATCAGAGGGTGAAGTTCACAAAAGACCATACTGTAAGACAAAAAGAAGAAGTATCTCCAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAATAATTGAAGTAAATCAAAATCAAAAGCAAGTGGAACAGGATATTAAAGTTGCTATATTTACACTGATGGTAGAAAT
AAATAAAAAAGGAAAAGCTCTACTGCATCAGCTAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNATTACATATCGATTACGGCACCTCCTTCGAGCAAGGTGTGATGCCTCCCCAGCAAC
CAACAATACCATTCAATTTCATTGTGATCCTGGTTTTTGGGCTCAAAATATTATCAATTTAGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCCACCCCCTCCACATATGTCACATTTTAAAAATCATAGACCCAAACTCAATGGATTAATTCTTCTTTCT
CATCCTCATCTGAGATCACCAAACCAGAATATACCACAAGTAATAGAGCCTAGCCCCTTATGGATGTCTTTTGTGGCTCA
GCAAGACATAACACAGTGGATCAGCAATAGAACTGCCCCATCAACAACCTCCTGTCCTCCTATTCTCACCATTACTAGTA
TGGTACGATATGACAAGGACTTTGGTTCACCTATGATCAATCTGAGCTCACCAGTGGAAAGTTCATATATTCTCTCTTCA
CTTTTAGATNNNNNNTGTTCAAGTACTATTATGCTGGACAATATTGTGAGGAAGGATACTAGCTTAGATCATGGCCAGCC
AAGACCACCCTCAAACAGAACTGTCCAGTCACCAAATTCATCAGTGCCATCTCCAGGCCTTGCAGGACCTGTGACTCTGA
CTAGTGTACATCCCCCAATACGTTCACCTAGTGCCTCCAGCGTTGGGAGCCGAGGAAGCTCTGGCTCTTCTAGCAAACCA
ACAGGGGCTGATTCTACACACAAAGTCCCAGTGGTCATGTTGGAACCCATCCGAATAAAACAAGAAAACAGTGGACCACC
AGAAAATTATGATTTTCCTGTTGTTATAGTGAAACAAGAATCAGATGAAGAATCTAGACCTCAAAATACGAATTATCCAA
GAAGCATACTCACTTCCCTGCTCTTAAATAGCAATCAGGGCTCTACTTCTGAGGAGACTGTGTTAAGATCAGATGCTCCA
GATAGCACAGGCGATCAACCTGGACTTCACCAGGAAAATTCCTCAAATGGAAAGTCTGAGTGGCTAGATGCTTCCCAGAA
GTCACCACTTCATGTTGGAGAGACAAGAAAAGAGGATGACCCCAATGAAGACTGGTGTGCAGTTTGTCAGAATGGAGGGG
AACTCTTGTGCTGTGAAAAATGTCCCAAAGTATTCCATCTTTCTTGTCATGTGCCCACATTGACAAATTTTCCAAGTGGA
GAGTGGATTTGCACTTTCTGCCGAGACTTATCTAAACCAGAAGTTGAATATGATTGTGATGCTCCCACTCACAACTCAGA
AAAAAAGAAAACTGAAGGCCTTTTTAAATTAACACCAATAGATAAAAGGAAGTGTGAACGGCTACTTTTATTTTATTGCC
ATGAAATGAGCCTGGCTTTTCAAGACCCAGTTCCTCTAACTGTGCCTGATTATTACAAAATAATTAAAAATCCAATGGAC
TTGTCAACCATCAAGAAAAGACTACAAGAAGATTATTCCATGTATACAAAGCCTGAAGACTTTGTAGCTGATTTTAGATT
GATCTTTCAAAATTGTGCTGAATTCAATGAGCCTGATTCAGAAGTAGCCAATGCTGGTATAAAACTTGAAAACTATTTTG
AAGAACTTCTAAAGAATCTTTATCCAGAAAAAAGGTTTCCTAAACTAGAATTCAGGAATGAATCAGAAGATAATAAATTT
AGTGACGATTCAGATGATGACTTTGTACAGCCCCGGAAAAAACGTGTCAAAAGCATTGAGGAACGCCAGCTGCTTAAATA
A
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 10 .31 RPM |
| SRP012922_cerebellum | 4 .54 RPM |
| SRP012922_heart | 15 .55 RPM |
| SRP012922_kidney | 7 .94 RPM |
| SRP012922_liver | 6 .81 RPM |
| SRP012922_lung | 15 .12 RPM |
| SRP012922_quadricep_muscle | 9 .87 RPM |
| SRP012922_spleen | 16 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012885 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1442 | 93.86 | 51.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000006533 retrocopies