Parental gene:

UBE2Q1, ENSDNOG00000008889

Aliases:None
Description:ubiquitin-conjugating enzyme E2Q family member 1 [Source:HGNC Symbol;Acc:15698]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_4929:114285..122604(-)


>ENSDNOG00000008889
ATGCAGCATCCGCCGCCGCATGGGCAGCAGCAGCCGGGGTCGGGGCACCAGCTGGGGGGCCAGGGGGCGGCGCCGGGGGC
CGGGGGCGGCCCGGGGGGGGGCCTGGGGCCGGGGCCCTGCCTGAGGCGGGAGCTGAAGCTGCTCGAGTCCATCTTCCACC
GCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTGCCTGGACGAGCTGAGCTGCGAGTTCCTGCTGGCTGGGGCCGGAGGG
GCCGGGGCGGGGGCCGCGCCCGGACCGCATCTCCCCCCGCGGGGTTCGGTGCCTGGGGATCCCGTCCGCATCCACTGCAA
CATCACGGAGTCATACCCTGCTGTACCCCCCATCTGGTCGGTGGAGTCTGATGACCCTAACTTGGCTGCTGTCTTGGAGA
GGCTGGTGGACATAAAAAAAGGGAATACTCTGCTATTACAGCATCTGAAGAGGATCATCTCCGACCTGTGTAAACTCTAT
AACCTCCCTCAGCATCCAGATGTGGAGATGCTGGATCAGCCCTTGCCAGCAGAGCAGTGTACACAGGAAGATGTGTCTTC
AGAAGATGAAGATGAGGAGATGCCTGAGGACACGGAAGACCTGGATCACTATGAAATGAAAGAAGAAGAACCAGCTGAGG
GCAAGAAGTCTGAAGATGATGGCATAGGAAAAGAAAACTTGGCCATACTAGAGAAAATTAAAAAGAACCAGAGGCAAGAT
TACTTAAATGGTGCGGTGTCTGGCTCGGTGCAGGCCACTGACCGGCTGATGAAGGAGCTCAGGGATATATACCGATCACA
GAGTTTCAAAGGTGGCAACTATGCAGTCGAACTCGTGAATGACAGTCTGTATGATTGGAATGTCAAACTCCTCAAAGTTG
ACCAGGACAGCGCTTTGCACAATGATCTCCAGATCCTCAAAGAAAAAGAAGGAGCTGACTTCATCTTACTTAACTTTTCC
TTTAAAGATAACTTTCCCTTTGACCCACCATTTGTCAGGGTTGTGTCTCCAGTCCTCTCTGGAGGGTATGTTCTGGGCGG
AGGCGCCATCTGCATGGAACTTCTCACCAAACAGGGCTGGAGCAGTGCCTACTCAATAGAGTCCGTGATTATGCAGATCA
GTGCCACACTGGTGAAGGGAAAAGCACGAGTGCAGTTTGGAGCCAACAAATCTCAATACAGTCTGACAAGAGCACAGCAG
TCCTACAAGTCCTTGGTGCAGATCCACGAAAAAAACGGCTGGTACACACCCCCAAAGGAAGATGGCTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 66 .51 RPM
SRP012922_cerebellum 86 .61 RPM
SRP012922_heart 24 .60 RPM
SRP012922_kidney 67 .08 RPM
SRP012922_liver 37 .77 RPM
SRP012922_lung 94 .38 RPM
SRP012922_quadricep_muscle 42 .58 RPM
SRP012922_spleen 80 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Macropus eugenii ENSMEUG00000003718 ortholog_one2one 2 retrogenes
retro_meug_1816, retro_meug_358,
Microcebus murinus ENSMICG00000001427 ortholog_one2one 1 retrogene
retro_mmur_339,
Rattus norvegicus ENSRNOG00000020791 ortholog_one2one 1 retrogene
retro_rnor_297,
Tupaia belangeri ENSTBEG00000013007 ortholog_one2one 1 retrogene
retro_tbel_3091,
Tursiops truncatus ENSTTRG00000013998 ortholog_one2one 1 retrogene
retro_ttru_975,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_449 75.63 56.16
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Download FASTA sequences of all ENSDNOG00000008889 retrocopies