Parental gene: | HAT1, ENSDNOG00000011848 |
| Aliases: | None |
| Description: | histone acetyltransferase 1 [Source:HGNC Symbol;Acc:4821] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_7336:5041..90002(+) |
>ENSDNOG00000011848
ATGGCGGGATTTGGTGCTATGGAGAAATTTTTGGTTGAATATAAGAGTGCAGTGGAGAAGAAACTGGCGGAGTACAAGTG
TAACACCAACACAGCAATTGAACTAAAATTAGTTCGCTTTCCTGAAGATCTTGAAAATGACATTAGAACTTTCTTTCCTG
AATATACCCATCAGCTCTTTGGGGATGATGAAACTGCTTTTGGTTACAAAGGTCTGAAGATCCTTTTATACTATATAGCT
GGTAGCCTGTCAACAATGTTCCGTGTTGAATATGCATCTAAAGTTGATGAAAACTTTGACTGTGTGGAGCTCTCTTTGCT
GGAAAAGGAAGTTGATTTCAAACCATTTGGAACCTTACTGCATACATACTCCGTTCTTAGTCCAACTGGAGGAGAAAACT
TTACCTTTCAGATATACAAGGCTGACATGACATGTAGAGGCTTTCGAGAATATCATGAAAGGCTTCAGACCTTTTTGATG
TGGTTTATTGAAACCGCTAGCTTTATTGACGTGGATGATGAAAGATGGCACTACTTTCTAGTATTTGAGAAGTATAATAA
GGATGGAGCTACGCTCTTTGCGACCGTGGGCTACATGACAGTCTATAATTACTATGTGTACCCAGACAAAACCCGGCCAC
GTGTAAGTCAGATGCTGATATTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTGGAAACAGTTCATAGATAC
TATATGGCATCTCCTTCGGTCCTTGATATAACAGCGGAAGATCCATCCAAAAGCTATGTGAAATTAAGAGACTTTGTGCT
TGTGAAGCTTTGTCAAGATTTGCCCTGTTTTTCCCGGGAAAAGTTAATGCAAGGATTCAATGACGATATGGCAATAGAGG
CACAACACAAGTTCAAAATAAATAAGCAACATGCTAGACGGGTTTATGAAATTCTTCGACTATTAGTAACTGACATGAGT
GATGCTGAACAATACAGAAGCTATAGATTGGATATTAAAAGAAGACTAATAAGTCCATATAAGAAAAAGCAGAGAGATCT
TGCCAAGATGAGAAAATGTCTCAGACCAGAAGAACTGACAAACCAAATGAACCAAATAGAAATAAGCATGCAGCATGAAC
AGCTGGAAGAAAGCTTTCAAGAACTTGTGGAAGACTACCGACGTGTTATTGAACGACTTGCTCAAGAGTAA
ATGGCGGGATTTGGTGCTATGGAGAAATTTTTGGTTGAATATAAGAGTGCAGTGGAGAAGAAACTGGCGGAGTACAAGTG
TAACACCAACACAGCAATTGAACTAAAATTAGTTCGCTTTCCTGAAGATCTTGAAAATGACATTAGAACTTTCTTTCCTG
AATATACCCATCAGCTCTTTGGGGATGATGAAACTGCTTTTGGTTACAAAGGTCTGAAGATCCTTTTATACTATATAGCT
GGTAGCCTGTCAACAATGTTCCGTGTTGAATATGCATCTAAAGTTGATGAAAACTTTGACTGTGTGGAGCTCTCTTTGCT
GGAAAAGGAAGTTGATTTCAAACCATTTGGAACCTTACTGCATACATACTCCGTTCTTAGTCCAACTGGAGGAGAAAACT
TTACCTTTCAGATATACAAGGCTGACATGACATGTAGAGGCTTTCGAGAATATCATGAAAGGCTTCAGACCTTTTTGATG
TGGTTTATTGAAACCGCTAGCTTTATTGACGTGGATGATGAAAGATGGCACTACTTTCTAGTATTTGAGAAGTATAATAA
GGATGGAGCTACGCTCTTTGCGACCGTGGGCTACATGACAGTCTATAATTACTATGTGTACCCAGACAAAACCCGGCCAC
GTGTAAGTCAGATGCTGATATTGACTCCATTTCAAGGTCAAGGCCATGGTGCTCAACTTCTGGAAACAGTTCATAGATAC
TATATGGCATCTCCTTCGGTCCTTGATATAACAGCGGAAGATCCATCCAAAAGCTATGTGAAATTAAGAGACTTTGTGCT
TGTGAAGCTTTGTCAAGATTTGCCCTGTTTTTCCCGGGAAAAGTTAATGCAAGGATTCAATGACGATATGGCAATAGAGG
CACAACACAAGTTCAAAATAAATAAGCAACATGCTAGACGGGTTTATGAAATTCTTCGACTATTAGTAACTGACATGAGT
GATGCTGAACAATACAGAAGCTATAGATTGGATATTAAAAGAAGACTAATAAGTCCATATAAGAAAAAGCAGAGAGATCT
TGCCAAGATGAGAAAATGTCTCAGACCAGAAGAACTGACAAACCAAATGAACCAAATAGAAATAAGCATGCAGCATGAAC
AGCTGGAAGAAAGCTTTCAAGAACTTGTGGAAGACTACCGACGTGTTATTGAACGACTTGCTCAAGAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 33 .45 RPM |
| SRP012922_cerebellum | 28 .73 RPM |
| SRP012922_heart | 22 .97 RPM |
| SRP012922_kidney | 23 .82 RPM |
| SRP012922_liver | 9 .60 RPM |
| SRP012922_lung | 37 .88 RPM |
| SRP012922_quadricep_muscle | 27 .00 RPM |
| SRP012922_spleen | 49 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryctolagus cuniculus | ENSOCUG00000005313 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000005620 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_2372 | 83.57 | 52.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000011848 retrocopies