Parental gene: | SPG20, ENSDNOG00000015441 |
| Aliases: | None |
| Description: | spastic paraplegia 20 (Troyer syndrome) [Source:HGNC Symbol;Acc:18514] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_3000:2431..34115(-) |
>ENSDNOG00000015441
ATGGAGCAAGAGCCACAAAATGGAGAAGCTGCTGAAATTAAGATCATTAGAGAGGCCTACAAGAAGGCCTTCTTATTTGT
TAATAAAGGATTGAATACGGATGAGTTAGGTCAGAAGGAAGAAGCCAAAAACTACTATAAGCAAGGAATAGGACACCTGC
TCAGAGGAATCAGCGTTTCGTCAGCAGAGCCCGAGCACACGGGGCCTGGCTGGGAGTCTGCTAGACAGATGCAGCAGAAG
ATGAAAGAAACTCTACAAAACGTGCGGGCCAGGTTGGAGATTCTGGAGAAAGGTCTCGCCACTTCTCTACAGAATGATCT
TCAGGAGGTGCCCAAATTATATCCAGAATTTCCTCCTAAAGAAATGTCAGACAAGCCAGCGGAAGCTCAGGTCTTCAGTT
CTGCTCCTCAGCACCCTGAAGTAAACGGAAGCACCTCCGATGCCAGCGTGGGGTCGGCACCTGGGCCGGCGCCTCTGGGC
AGGCCACCTCCCAGCTGCCCCGCAGAGGCGCCTCCTGCTTACACCCCTCAGGCCGCCGAGGGCCACTACACTGTGTCCTA
CGGGACAGATTCGGGAGAATATTCCTCAGTTGGGGAGAACTTCTACAGGAACCATTCTCAGCCACCTCCTCTTGAGACCC
TGGGGCTCGATGCCGATGAGTTGATCTTGATACCAAATGGAGTACAGATTTTTTTTGTAAACCCAGCAGGGGAGGTTAGC
GCACCTTCATATCCTGGTTATCTTCGCATTGTGAGGTTCTTGGATAATTCTCTCGATACGGTTCTGAACCGTCCTCCTGG
GTTTCTTCAGGTTTGTGACTGGTTATATCCTCTAGTTCCTGATAGATCTCCAGTTCTGAAATGTACTGCAGGAGCCTACA
TGTTTCCTGATACAATGTTACAAGCATCAGGGTGCTTTGTGGGGGTCGTCTTGTCATCTGAATTACCTGAAGATGACAGA
GAACTCTTTGAGGATCTTTTAAGACAAATGTCTGACCTTCGGCTCCAGGCCAACTGGAATAGGGCTGAAGGAGAAAGCGA
ATTCCAAATCCCTGGAAGAATGAGGCACTCCTCTGACCAGTTAAAGGAAGCCTCTGGCACTGATGTGAGACAGTTGGGTC
CTTCTTTGGACCAAGGCAATAAGGATGTACGTCATAAAGAAAAACGTGGGAAAAAGGCTAAGAATACTTCAAGTGAAGAA
GTTAATCTGAGTCACATTGTACCCTGTGAACCAGTATCAGAAGAAAAAGCAAAGGAATTANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGTGCTTCCTGGGTGAGTTGGGGCTTAGTTAAAGGTGCTGAATTTACTGGCAAAGCAATTC
AGAAAGGTGCTTCTAAACTCCGAGAACGTATTCAACTAGAAGAAAAACTCGTGGAAGTTAGCTCAGCTGTGAGCAGGGGA
CTTCATCTAGCAAAGCAGGCTACAGGAGGAGCAGCGAAAGTCAGCCAGTTCCTGGTTGATGGAGTTTGCACTGTAGCAAA
TTGTGTTGGAAAAGAACTAGCTCCACATGTCAAGAAGCATGGAAGTAAACTTGTTCCAGAGTCTCTTAAAAAAGACAAAG
ATGGGAAGTCCCCTCTGGATGGTGCGCTGGTCATAGCGGCAAGTAGTGTTCAAGGATTTTCAACCGTCTGGCAGGGATTG
GAATGTGCAGCTAAATGCATTGTTAACAATGTTTCTGCAGAGACTGTACAAACTGTCAGATACAAATATGGGCATAATGC
GGGAGAAGCGACACACGACGCAGTGGATTCTGCCATCAACGTTGGCATGACTGCCTATAACATCGACAACATTGGTGTCA
GAGCGATGGTGAAGAAAACTGCAAAGCAAACAGGCCACGCCCTCCTGGAGGACTATAAAATAGTTGATGGTTCTCAGGGG
AAAAGTCAGCAGAAAGGAGCTAATGTGTACTCTGCTGGGGAGAAAGATGAGCTGGGAAAGGATGAGGAGGAGGCCAAGAA
GAAAGAGCAGTGA
ATGGAGCAAGAGCCACAAAATGGAGAAGCTGCTGAAATTAAGATCATTAGAGAGGCCTACAAGAAGGCCTTCTTATTTGT
TAATAAAGGATTGAATACGGATGAGTTAGGTCAGAAGGAAGAAGCCAAAAACTACTATAAGCAAGGAATAGGACACCTGC
TCAGAGGAATCAGCGTTTCGTCAGCAGAGCCCGAGCACACGGGGCCTGGCTGGGAGTCTGCTAGACAGATGCAGCAGAAG
ATGAAAGAAACTCTACAAAACGTGCGGGCCAGGTTGGAGATTCTGGAGAAAGGTCTCGCCACTTCTCTACAGAATGATCT
TCAGGAGGTGCCCAAATTATATCCAGAATTTCCTCCTAAAGAAATGTCAGACAAGCCAGCGGAAGCTCAGGTCTTCAGTT
CTGCTCCTCAGCACCCTGAAGTAAACGGAAGCACCTCCGATGCCAGCGTGGGGTCGGCACCTGGGCCGGCGCCTCTGGGC
AGGCCACCTCCCAGCTGCCCCGCAGAGGCGCCTCCTGCTTACACCCCTCAGGCCGCCGAGGGCCACTACACTGTGTCCTA
CGGGACAGATTCGGGAGAATATTCCTCAGTTGGGGAGAACTTCTACAGGAACCATTCTCAGCCACCTCCTCTTGAGACCC
TGGGGCTCGATGCCGATGAGTTGATCTTGATACCAAATGGAGTACAGATTTTTTTTGTAAACCCAGCAGGGGAGGTTAGC
GCACCTTCATATCCTGGTTATCTTCGCATTGTGAGGTTCTTGGATAATTCTCTCGATACGGTTCTGAACCGTCCTCCTGG
GTTTCTTCAGGTTTGTGACTGGTTATATCCTCTAGTTCCTGATAGATCTCCAGTTCTGAAATGTACTGCAGGAGCCTACA
TGTTTCCTGATACAATGTTACAAGCATCAGGGTGCTTTGTGGGGGTCGTCTTGTCATCTGAATTACCTGAAGATGACAGA
GAACTCTTTGAGGATCTTTTAAGACAAATGTCTGACCTTCGGCTCCAGGCCAACTGGAATAGGGCTGAAGGAGAAAGCGA
ATTCCAAATCCCTGGAAGAATGAGGCACTCCTCTGACCAGTTAAAGGAAGCCTCTGGCACTGATGTGAGACAGTTGGGTC
CTTCTTTGGACCAAGGCAATAAGGATGTACGTCATAAAGAAAAACGTGGGAAAAAGGCTAAGAATACTTCAAGTGAAGAA
GTTAATCTGAGTCACATTGTACCCTGTGAACCAGTATCAGAAGAAAAAGCAAAGGAATTANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGTGCTTCCTGGGTGAGTTGGGGCTTAGTTAAAGGTGCTGAATTTACTGGCAAAGCAATTC
AGAAAGGTGCTTCTAAACTCCGAGAACGTATTCAACTAGAAGAAAAACTCGTGGAAGTTAGCTCAGCTGTGAGCAGGGGA
CTTCATCTAGCAAAGCAGGCTACAGGAGGAGCAGCGAAAGTCAGCCAGTTCCTGGTTGATGGAGTTTGCACTGTAGCAAA
TTGTGTTGGAAAAGAACTAGCTCCACATGTCAAGAAGCATGGAAGTAAACTTGTTCCAGAGTCTCTTAAAAAAGACAAAG
ATGGGAAGTCCCCTCTGGATGGTGCGCTGGTCATAGCGGCAAGTAGTGTTCAAGGATTTTCAACCGTCTGGCAGGGATTG
GAATGTGCAGCTAAATGCATTGTTAACAATGTTTCTGCAGAGACTGTACAAACTGTCAGATACAAATATGGGCATAATGC
GGGAGAAGCGACACACGACGCAGTGGATTCTGCCATCAACGTTGGCATGACTGCCTATAACATCGACAACATTGGTGTCA
GAGCGATGGTGAAGAAAACTGCAAAGCAAACAGGCCACGCCCTCCTGGAGGACTATAAAATAGTTGATGGTTCTCAGGGG
AAAAGTCAGCAGAAAGGAGCTAATGTGTACTCTGCTGGGGAGAAAGATGAGCTGGGAAAGGATGAGGAGGAGGCCAAGAA
GAAAGAGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 46 .28 RPM |
| SRP012922_cerebellum | 73 .13 RPM |
| SRP012922_heart | 31 .09 RPM |
| SRP012922_kidney | 57 .50 RPM |
| SRP012922_liver | 39 .63 RPM |
| SRP012922_lung | 82 .17 RPM |
| SRP012922_quadricep_muscle | 42 .75 RPM |
| SRP012922_spleen | 68 .45 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1307 | 94.34 | 65.37 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000015441 retrocopies