Parental gene:

ENSDORG00000000974

Aliases:None
Description:None
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:GeneScaffold_6476:3586..6295(+)


>ENSDORG00000000974
GTACAAGTCATAGCTTGTGTCCAGACCAAGGAATTAGGATTCCCAGCATTACTCGTTTTCCCTCCTTTTCATGTTATATG
GGGCCATCCCTCTGGGGTGGCTCCTGCCCCTCCTAAAGCCGAAGCCAAGGAAAAGGCTTTGAAGGCCAAGAAGGCAGTGC
TGAAAGGTGTCCACAGCCACAAAAAGAAGAAGATCCGCACTTCACCCACCTTCCGGCGGCCCAAGACGCTACGGCTCCGA
AGACAGCCCAAATACCCTCGGAAGAGTGCTCCAAGGAGAAACAAGCTTGACCACTATGCTATCATCAAGTTCCCCCTGAC
CACTGAGTCAGCCATGAAGAAAATAGAAGACAACAACACACTTGTGTTCATTGTGGATGTTAAGGCCAACAAGCATCAGA
TCAAACAGGCTGTGAAGAAGCTCTATGACATTGATGTGGCTAAGGTCAATACCCTGATCAGACCTGATGGAGAGAAGAAG
GCATATGTTCGACTGGCTCCTGATTACGATGCTTTAGATGTTGCCAACAAAATTGGAATCATCTAA

Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000016736 possible_ortholog 26 retrogenes
retro_ggor_1027, retro_ggor_1028, retro_ggor_1123, retro_ggor_120, retro_ggor_123, retro_ggor_1284, retro_ggor_140, retro_ggor_1431, retro_ggor_158, retro_ggor_1650, retro_ggor_1743, retro_ggor_1789, retro_ggor_1911, retro_ggor_1948, retro_ggor_2164, retro_ggor_2239, retro_ggor_2285, retro_ggor_229, retro_ggor_2409, retro_ggor_2475, retro_ggor_2568, retro_ggor_2764, retro_ggor_2773, retro_ggor_580, retro_ggor_611, retro_ggor_642,
Loxodonta africana ENSLAFG00000013387 possible_ortholog 16 retrogenes
retro_lafr_1176, retro_lafr_153, retro_lafr_237, retro_lafr_33, retro_lafr_335, retro_lafr_442, retro_lafr_510, retro_lafr_525, retro_lafr_551, retro_lafr_557, retro_lafr_643, retro_lafr_78, retro_lafr_891, retro_lafr_908, retro_lafr_957, retro_lafr_96,
Monodelphis domestica ENSMODG00000019297 possible_ortholog 3 retrogenes
retro_mdom_120, retro_mdom_870, retro_mdom_912,
Ochotona princeps ENSOPRG00000012620 ortholog_one2one 49 retrogenes
retro_opri_102, retro_opri_1021, retro_opri_1027, retro_opri_1058, retro_opri_1153, retro_opri_1157, retro_opri_1163, retro_opri_1181, retro_opri_119, retro_opri_129, retro_opri_150, retro_opri_156, retro_opri_163, retro_opri_172, retro_opri_182, retro_opri_195, retro_opri_225, retro_opri_226, retro_opri_253, retro_opri_272, retro_opri_323, retro_opri_332, retro_opri_44, retro_opri_452, retro_opri_485, retro_opri_504, retro_opri_507, retro_opri_54, retro_opri_548, retro_opri_555, retro_opri_617, retro_opri_620, retro_opri_621, retro_opri_68, retro_opri_708, retro_opri_715, retro_opri_754, retro_opri_767, retro_opri_813, retro_opri_817, retro_opri_859, retro_opri_869, retro_opri_87, retro_opri_899, retro_opri_923, retro_opri_932, retro_opri_981, retro_opri_982, retro_opri_998,
Sarcophilus harrisii ENSSHAG00000014549 possible_ortholog 13 retrogenes
retro_shar_188, retro_shar_373, retro_shar_407, retro_shar_448, retro_shar_498, retro_shar_564, retro_shar_624, retro_shar_630, retro_shar_685, retro_shar_698, retro_shar_824, retro_shar_829, retro_shar_835,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_36 67.96 55.80
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2. retro_dord_102 93.24 81.77
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3. retro_dord_310 84.93 80.11
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4. retro_dord_316 83.11 80.11
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5. retro_dord_427 73.17 88.95
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6. retro_dord_469 94.67 81.77
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7. retro_dord_567 87.62 58.01
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8. retro_dord_622 69.33 81.77
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9. retro_dord_628 84.46 81.77
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10. retro_dord_735 93.92 81.77
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Download FASTA sequences of all ENSDORG00000000974 retrocopies