Parental gene: | Gatad1, ENSDORG00000005895 |
| Aliases: | None |
| Description: | GATA zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1914460] |
| Organism: | Kangaroo rat (Dipodomys ordii) |
| Coordinates: | GeneScaffold_4272:26086..36166(+) |
>ENSDORG00000005895
ATGCCGCTGGGCCTGAAGCCCACCTGCAGCGTCTGCAAGACCACGTCGTCCTCCATGTGGAAGAAGGGCCCGCAGGGGGA
GATCCTGTGCCACCACTGCACGGGCCGGGGCGGCGCGGGCGGCGGCGCGGGGCCGGCGGGCGGCGGCGGCGGCTTCGGCG
CGGCCACCTTCGCCAGCACCTCGGCCGCCCCTCCGCAAAGCAACGGGGGCGGGGGCGGCAAGCAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGAA
AGGGAGAGACCATATTTTAAAAATGCCTATCAAAGCTCCTGAGTCTGTTTCCACCATCATCACTGCAGAATCAATCTTCT
ACAAGGGAGTATATTACCAAATTGGTGATGTTGTTTCTGTGATTGATGAACAAGATGGAAAGCTCTACTATGCTCAGATC
AGGGGTTTTATCCAGGACCAGTACTGTGAGAAGAGCGCAGCACTGACATGGCTCATTCCTACTCTGTCTAGCCCCACAGA
TCAGTTTGATCCTGCATCTTATATCATACCAGAGGAAGACCTACCGAGGAAGATGGAATACTTGGAATTTGTTTGTCATG
CACCTTCTGAGTATTTCAAGTCAAGGTCATCACCATTTCCCACTGTCCCCACCAGACCAGAGAAGGGCTATATATGGACT
CATGTTGGACCTACTCCTGCAATAACAATTAAGGAGACAGTTGCCAACCACTTGTAG
ATGCCGCTGGGCCTGAAGCCCACCTGCAGCGTCTGCAAGACCACGTCGTCCTCCATGTGGAAGAAGGGCCCGCAGGGGGA
GATCCTGTGCCACCACTGCACGGGCCGGGGCGGCGCGGGCGGCGGCGCGGGGCCGGCGGGCGGCGGCGGCGGCTTCGGCG
CGGCCACCTTCGCCAGCACCTCGGCCGCCCCTCCGCAAAGCAACGGGGGCGGGGGCGGCAAGCAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGAA
AGGGAGAGACCATATTTTAAAAATGCCTATCAAAGCTCCTGAGTCTGTTTCCACCATCATCACTGCAGAATCAATCTTCT
ACAAGGGAGTATATTACCAAATTGGTGATGTTGTTTCTGTGATTGATGAACAAGATGGAAAGCTCTACTATGCTCAGATC
AGGGGTTTTATCCAGGACCAGTACTGTGAGAAGAGCGCAGCACTGACATGGCTCATTCCTACTCTGTCTAGCCCCACAGA
TCAGTTTGATCCTGCATCTTATATCATACCAGAGGAAGACCTACCGAGGAAGATGGAATACTTGGAATTTGTTTGTCATG
CACCTTCTGAGTATTTCAAGTCAAGGTCATCACCATTTCCCACTGTCCCCACCAGACCAGAGAAGGGCTATATATGGACT
CATGTTGGACCTACTCCTGCAATAACAATTAAGGAGACAGTTGCCAACCACTTGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000193 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000010701 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000014806 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dord_267 | 83.33 | 58.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dord_270 | 83.44 | 59.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dord_300 | 83.97 | 58.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dord_318 | 78.06 | 59.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dord_363 | 87.84 | 56.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dord_459 | 82.69 | 58.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dord_463 | 82.80 | 58.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_dord_504 | 72.60 | 56.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_dord_551 | 87.84 | 56.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_dord_566 | 77.85 | 56.59 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDORG00000005895 retrocopies