Parental gene: | SMARCB1, ENSECAG00000007797 |
| Aliases: | None |
| Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:HGNC Symbol;Acc:11103] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 8:2667210..2699829(-) |
>ENSECAG00000007797
GACGGCGAGTTCTACATGATCAGCTGTGAGGTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCC
CTCACTCTGGAGGCGACTAGCCACTGTGGAGGAGAGGAAGAAAATAGTTGCATCGTCACATGGTAAAAAAACAAAACCTA
ACACTAAGGATCATGGGTACACGACCCTGGCCACCAGCGTGACTCTGTTAAAAGCCTCAGAGGTGGAAGAGATTCTGGAT
GGCAACGATGAGAAGTACAAGGCGGTGTCCATCAGCACGGAGCCCCCCACCTACCTCAGGGAACAGAAAGCCAAGAGGAA
CAGCCAGTGGGTGCCAACCCTGCCCAACAGCTCCCACCATCTAGACGCTGTGCCCTGCTCCACGACTATCAACAGGAACC
GCATGGGCCGGGACAAGAAGAGAACCTTCCCTCTCTGCTTTGATGACCACGACCCAGCTGTGATCCACGAGAATGCGTCC
CAGCCTGAGGTGCTGGTCCCTATCCGACTGGACATGGAGATCGATGGGCAGAAGCTGCGGGACGCCTTTACCTGGAACAT
GAATGAGAAGTTGATGACCCCTGAGATGTTTTCAGAAATCCTCTGTGATGACCTGGATTTGAACCCACTGACATTCGTGC
CAGCCATCGCCTCTGCCATCAGGCAGCAGATCGAATCATATCATCTTGACGCCGTCAGCAGGGATAAAGGGCAGAAAAGA
GTGTGCTGGCCACTGAACATCCACGTGGGAAACATCTCCCTGGTGGACCAGTTCGAGTGGGACATGTCAGAGAAGGAGAA
CTCACCGGAGAAGTTTGCCCTGAAGCTGTGCTCAGAGCTGGGGCTGGGCGGGGAGTTCGTCACCACCATTGCGTACAGCA
TTCGGGGACAGCTGAGCTGGCATCAGAAGACCTACGCCTTCAGTGAGAACCCCCTGCCCACGGTGGAGATTGCCATCCGG
AACACAGGCGATGCTGACCAGTGGTGTCCGCTGCTGGAGACCCTGACAGACGCCGAGATGGAAAAGAAGATCCGGGACCA
GGACAGGAACACAAGGCGGATGCGGCGTCTCGCCAACACTGCCCCGGCCTGGTAA
GACGGCGAGTTCTACATGATCAGCTGTGAGGTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCC
CTCACTCTGGAGGCGACTAGCCACTGTGGAGGAGAGGAAGAAAATAGTTGCATCGTCACATGGTAAAAAAACAAAACCTA
ACACTAAGGATCATGGGTACACGACCCTGGCCACCAGCGTGACTCTGTTAAAAGCCTCAGAGGTGGAAGAGATTCTGGAT
GGCAACGATGAGAAGTACAAGGCGGTGTCCATCAGCACGGAGCCCCCCACCTACCTCAGGGAACAGAAAGCCAAGAGGAA
CAGCCAGTGGGTGCCAACCCTGCCCAACAGCTCCCACCATCTAGACGCTGTGCCCTGCTCCACGACTATCAACAGGAACC
GCATGGGCCGGGACAAGAAGAGAACCTTCCCTCTCTGCTTTGATGACCACGACCCAGCTGTGATCCACGAGAATGCGTCC
CAGCCTGAGGTGCTGGTCCCTATCCGACTGGACATGGAGATCGATGGGCAGAAGCTGCGGGACGCCTTTACCTGGAACAT
GAATGAGAAGTTGATGACCCCTGAGATGTTTTCAGAAATCCTCTGTGATGACCTGGATTTGAACCCACTGACATTCGTGC
CAGCCATCGCCTCTGCCATCAGGCAGCAGATCGAATCATATCATCTTGACGCCGTCAGCAGGGATAAAGGGCAGAAAAGA
GTGTGCTGGCCACTGAACATCCACGTGGGAAACATCTCCCTGGTGGACCAGTTCGAGTGGGACATGTCAGAGAAGGAGAA
CTCACCGGAGAAGTTTGCCCTGAAGCTGTGCTCAGAGCTGGGGCTGGGCGGGGAGTTCGTCACCACCATTGCGTACAGCA
TTCGGGGACAGCTGAGCTGGCATCAGAAGACCTACGCCTTCAGTGAGAACCCCCTGCCCACGGTGGAGATTGCCATCCGG
AACACAGGCGATGCTGACCAGTGGTGTCCGCTGCTGGAGACCCTGACAGACGCCGAGATGGAAAAGAAGATCCGGGACCA
GGACAGGAACACAAGGCGGATGCGGCGTCTCGCCAACACTGCCCCGGCCTGGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 48 .43 RPM |
| SRP021940_embryo | 147 .20 RPM |
| SRP021940_cerebellum | 81 .69 RPM |
| SRP021940_testis | 57 .93 RPM |
| SRP021940_placental_villous | 43 .44 RPM |
| SRP021940_articular_cartilage | 20 .01 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_120 | 65.08 | 78.85 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ecab_121 | 69.39 | 53.02 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000007797 retrocopies