Parental gene: | SENP2, ENSECAG00000011230 |
| Aliases: | None |
| Description: | SUMO1/sentrin/SMT3 specific peptidase 2 [Source:HGNC Symbol;Acc:23116] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 19:23761700..23799503(+) |
>ENSECAG00000011230
ATGTACAAATGGCTGGTTAGGATTCTCGGCACCATTTTCCGTCTCTGTGACCGGCCGGTGCCCCCTGCCCGGGCCCTCCT
GAAGAGGCGGCGCTCGAACAGCACTCTGTTGTCTACAGTGGACACTGATGAAATACCAGCCAAAAGACCAAGATTAGATT
GTTTTATTCACCAAGTGAAAACCAGTCTCTACAATGCTGCCAGCTTATTTGGATTCCCATTCCAGCTGAACACAAAGCCC
ATGGTAACTGCTGCTTGTAATGGAACACGGAATGTGGCCCCTTCAGAAGAGGTATTTTCAAACTCATCATCTTGTGAACT
GACAGGTTCTGGATCCTGGAACAACATGCTGAAACTGGGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCA
GAGTGACAGTAACCCGAGATCAGCCTCGCAGAGTCCTGCCTTCCTTTGGTTTTACCTTGAACTCAGAAGGCTATAATAGA
AGACCCGGTGGCCGACGCCATAGCAAAAGCAATCCAGAGAGTTCCTTAACGTGGAAACCTCAAGAGCAGGTTGTAACAGA
GATGATCTCTGAAGAGGGTGGCAAGGGTCTGAGGCGTCCCCATTGTACAGTGGAGGAGGGTGTTCAAAAAGAGGAAAGAG
AGAAGTACCGGAGGTTATTGGAGCGACTTAAAGAAGGTGGTCATGGAAACACTGTTCCTCCTGTAACTTCAGCTCATCAT
AGTTCTCAAAGAAGTCACACGGACACATTAAAGACCAAAGGCTGGGGGGAAGAGCAAAGTCACGGAGTCAAAACAGCTCA
GTTTGTTCCAAAACCATATAGAGTTGTTGAAACAAGGGGACCTCTGTGTTCTGTGAGAAGTGAAAAGAGATGTTCAAAGG
GGAAAATTTCTGATATAGAGAAGACAGTTGGAATCAGACTCGAAAATGAAGGTAGGAGAGGACACCAGCTGGAACCTGAC
CTGTCTGAAGAAGTGTCAGCCCGGCTCCGCCTAGGCAGTGGAAGCAATGGCTTACTCAGGAGGAAGATGTCAATACTTGA
GACTAAAGAGAAAAATTGCTCAGGCAGAGACAGGGATAAGAGGACGGATGATCTTCTTGAACTTACAGAGGACATGGAAA
AGGAAATCAGTAATGCCCTAGGCCATGGCCCTCAGGATGAGATTCTAAGTAGCGCTTTCAAACTCCGAATCACTCGAGGA
GATATCCAGACCTTGAAGAACTATCACTGGCTCAATGACGAAGTCATTAATTTTTACATGAATCTTCTGGTGGAAAGAAA
TAAAAAACAAGGGTATCCAGCACTTCATGCATTCAGTACTTTCTTCTATCCCAAATTAAAGTCTGGGGGTTACCAAGCAG
TGAAAAGATGGACCAAAGGGGTCAATCTCTTTGAACAGGAACTTATTCTGGTGCCTATTCATCGGAAGGTACATTGGAGC
CTGGTGGTGATAGACCTAAGAAAAAAGTGTCTTAAATATCTGGATTCTATGGGACAAAAGGGCCACAGGATCTGTGAGCT
TCTCCTTCAGTATTTACAGGATGAAAGTAAGACCAAAAGAAATATTGATCTGAATCTTTTAGAGTGGACCCACTACAGCA
TGAAGCCACATGAGATTCCTCAACAGTTGAATGGGAGTGATTGTGGGATGTTTACTTGTAAATATGCAGATTATATCTCT
AGGGACAAACCTATCACATTTACTCAGCACCAGATGCCTCTCTTCCGGAAGAAGATGGTGTGGGAAATCCTTCATCAGCA
GTTACTGTGA
ATGTACAAATGGCTGGTTAGGATTCTCGGCACCATTTTCCGTCTCTGTGACCGGCCGGTGCCCCCTGCCCGGGCCCTCCT
GAAGAGGCGGCGCTCGAACAGCACTCTGTTGTCTACAGTGGACACTGATGAAATACCAGCCAAAAGACCAAGATTAGATT
GTTTTATTCACCAAGTGAAAACCAGTCTCTACAATGCTGCCAGCTTATTTGGATTCCCATTCCAGCTGAACACAAAGCCC
ATGGTAACTGCTGCTTGTAATGGAACACGGAATGTGGCCCCTTCAGAAGAGGTATTTTCAAACTCATCATCTTGTGAACT
GACAGGTTCTGGATCCTGGAACAACATGCTGAAACTGGGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCA
GAGTGACAGTAACCCGAGATCAGCCTCGCAGAGTCCTGCCTTCCTTTGGTTTTACCTTGAACTCAGAAGGCTATAATAGA
AGACCCGGTGGCCGACGCCATAGCAAAAGCAATCCAGAGAGTTCCTTAACGTGGAAACCTCAAGAGCAGGTTGTAACAGA
GATGATCTCTGAAGAGGGTGGCAAGGGTCTGAGGCGTCCCCATTGTACAGTGGAGGAGGGTGTTCAAAAAGAGGAAAGAG
AGAAGTACCGGAGGTTATTGGAGCGACTTAAAGAAGGTGGTCATGGAAACACTGTTCCTCCTGTAACTTCAGCTCATCAT
AGTTCTCAAAGAAGTCACACGGACACATTAAAGACCAAAGGCTGGGGGGAAGAGCAAAGTCACGGAGTCAAAACAGCTCA
GTTTGTTCCAAAACCATATAGAGTTGTTGAAACAAGGGGACCTCTGTGTTCTGTGAGAAGTGAAAAGAGATGTTCAAAGG
GGAAAATTTCTGATATAGAGAAGACAGTTGGAATCAGACTCGAAAATGAAGGTAGGAGAGGACACCAGCTGGAACCTGAC
CTGTCTGAAGAAGTGTCAGCCCGGCTCCGCCTAGGCAGTGGAAGCAATGGCTTACTCAGGAGGAAGATGTCAATACTTGA
GACTAAAGAGAAAAATTGCTCAGGCAGAGACAGGGATAAGAGGACGGATGATCTTCTTGAACTTACAGAGGACATGGAAA
AGGAAATCAGTAATGCCCTAGGCCATGGCCCTCAGGATGAGATTCTAAGTAGCGCTTTCAAACTCCGAATCACTCGAGGA
GATATCCAGACCTTGAAGAACTATCACTGGCTCAATGACGAAGTCATTAATTTTTACATGAATCTTCTGGTGGAAAGAAA
TAAAAAACAAGGGTATCCAGCACTTCATGCATTCAGTACTTTCTTCTATCCCAAATTAAAGTCTGGGGGTTACCAAGCAG
TGAAAAGATGGACCAAAGGGGTCAATCTCTTTGAACAGGAACTTATTCTGGTGCCTATTCATCGGAAGGTACATTGGAGC
CTGGTGGTGATAGACCTAAGAAAAAAGTGTCTTAAATATCTGGATTCTATGGGACAAAAGGGCCACAGGATCTGTGAGCT
TCTCCTTCAGTATTTACAGGATGAAAGTAAGACCAAAAGAAATATTGATCTGAATCTTTTAGAGTGGACCCACTACAGCA
TGAAGCCACATGAGATTCCTCAACAGTTGAATGGGAGTGATTGTGGGATGTTTACTTGTAAATATGCAGATTATATCTCT
AGGGACAAACCTATCACATTTACTCAGCACCAGATGCCTCTCTTCCGGAAGAAGATGGTGTGGGAAATCCTTCATCAGCA
GTTACTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 3 .90 RPM |
| SRP021940_embryo | 8 .87 RPM |
| SRP021940_cerebellum | 6 .80 RPM |
| SRP021940_testis | 49 .24 RPM |
| SRP021940_placental_villous | 6 .01 RPM |
| SRP021940_articular_cartilage | 5 .25 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Rattus norvegicus | ENSRNOG00000001773 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008239 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_586 | 97.28 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000011230 retrocopies