Parental gene: | PPP2R1B, ENSECAG00000012108 |
| Aliases: | None |
| Description: | protein phosphatase 2, regulatory subunit A, beta [Source:HGNC Symbol;Acc:9303] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 7:20333176..20352050(-) |
>ENSECAG00000012108
GGGGGAGATGGAGACGATTCGCTATATCCGATCGCGGTTCTAATCGACGAGCTCCGCAATGAGGACGTGCAGCTCCGTCT
CAACAGTATTAAGAAGTTATCAACAATTGCTCTAGCACTTGGAGTAGAAAGGACGCGAACTGAACTGCTGCCATTCCTTA
CAGATACAATTTATGATGAAGATGAGGTACTGTTAGCTCTTGCAGAGCAGCTGGGAAATTTCACCGGCCTCGTGGGAGGT
CCTGACTTTGCCCACTGTTTGCTGCCTCCTTTGGAAAGCCTGGCGACTGTGGAAGAGACTGTGGTTCGCGACAAGGCGGT
GGAGTCCCTGAGGCAGATCTCCCAGGAGCATACTCCTGTGGCTCTGGAAGCTCATTTTGTACCTCTGGTGAAACGCCTGG
CGAGTGGGGATTGGTTCACTTCTCGCACATCTGCGTGTGGTTTGTTCAGCGTTTGCTATCCCAGGGCTTCAAATGCTCTC
AAAGCAGAAATTAGACAATGCTTCCGTTCCTTGTGCACAGATGACACACCAATGGTACGACGTGCTGCTGCTTCCAAGTT
GGGTGAATTTGCAAAAGTTTTGGAATTAGACAGTGTGAAAAGTGAAATTGTTCCATTGTTTACTAATCTAGCTTCAGATG
AACAGGATTCAGTGCGCCTCCTAGCTGTGGAAGCTTGTGTCAGTATTGCCCAGTTACTGTCTCAGGATGACCTTGAGGCT
TTGGTGATGCCCACCCTTCGACAAGCAGCGGAAGATAAATCCTGGCGAGTTCGCTATATGGTAGCTGACAAATTTTCAGA
GCTCCAGAAAGCTGTGGGTCCTAAAATCACCCTAAGTGACCTCATCCCCGCCTTTCAGAACCTACTTAAAGACTGCGAAG
CTGAAGTGCGAGCAGCTGCCGCCCACAAAGTCAAAGAACTTTGTGAGAACTTGCCCATTGAAGGTGGACAAGGGATGCAT
GGGACAGATATGTTAATATATGACATTGAATTAGTGTCTGATACAAATCAACATGTCAAATCAGCTCTAGCTTCTGTAAT
TATGGGATTGTCTACAATTTTGGGCAAAGAGAATACCATTGAACATCTTCTACCTCTTTTTTTAGCTCAGTTAAAGGATG
AGTGTCCTGAAGTTCGTTTGAATATCATCTCCAATTTGGATTGTGTAAATGAAGTGATTGGCATCCGTCAGCTCTCTCAG
TCTCTCCTTCCTGCCATAGTGGAGCTGGCTGAAGATGCCAAGTGGAGGGTCCGGCTGGCTATCATTGAGTATATGCCTCT
GCTGGCAGGCCAGCTGGGTGTGGAATTCTTTGATGAAAAGCTGAATTCTTTATGTATGGCCTGGCTTGTGGACCATGTAT
ATGCCATCCGTGAAGCCGCCACTAGCAACCTCATGAAACTAGTTCAGAAGTTTGGTACAGAGTGGGCCCAAAATACCATT
GTTCCCAAAGTGTTAGTAATGGCAAATGATCCTAATTACTTGCATAGAATGACCACTTTATTCTGCATTAACGCACTGTC
CGAAGCCTGTGGTCAAGAAATAACCACTAAGCAGATGCTGCCCATCGTCTTGAAAATGGCAGGAGACCAAGTAGCGAATG
TCCGTTTCAATGTGGCCAAATCTCTACAGAAAATTGGACCAATTCTAGATACTGAGGCTTTGCAGGAGGAAGTTAAGCCG
GTACTGCAGAAGTTAGGCCAAGATGAAGACATGGATGTCAAATACTTTGCACAGGAAGCAATAAGTGTGCTTGCGTTGGC
ATAA
GGGGGAGATGGAGACGATTCGCTATATCCGATCGCGGTTCTAATCGACGAGCTCCGCAATGAGGACGTGCAGCTCCGTCT
CAACAGTATTAAGAAGTTATCAACAATTGCTCTAGCACTTGGAGTAGAAAGGACGCGAACTGAACTGCTGCCATTCCTTA
CAGATACAATTTATGATGAAGATGAGGTACTGTTAGCTCTTGCAGAGCAGCTGGGAAATTTCACCGGCCTCGTGGGAGGT
CCTGACTTTGCCCACTGTTTGCTGCCTCCTTTGGAAAGCCTGGCGACTGTGGAAGAGACTGTGGTTCGCGACAAGGCGGT
GGAGTCCCTGAGGCAGATCTCCCAGGAGCATACTCCTGTGGCTCTGGAAGCTCATTTTGTACCTCTGGTGAAACGCCTGG
CGAGTGGGGATTGGTTCACTTCTCGCACATCTGCGTGTGGTTTGTTCAGCGTTTGCTATCCCAGGGCTTCAAATGCTCTC
AAAGCAGAAATTAGACAATGCTTCCGTTCCTTGTGCACAGATGACACACCAATGGTACGACGTGCTGCTGCTTCCAAGTT
GGGTGAATTTGCAAAAGTTTTGGAATTAGACAGTGTGAAAAGTGAAATTGTTCCATTGTTTACTAATCTAGCTTCAGATG
AACAGGATTCAGTGCGCCTCCTAGCTGTGGAAGCTTGTGTCAGTATTGCCCAGTTACTGTCTCAGGATGACCTTGAGGCT
TTGGTGATGCCCACCCTTCGACAAGCAGCGGAAGATAAATCCTGGCGAGTTCGCTATATGGTAGCTGACAAATTTTCAGA
GCTCCAGAAAGCTGTGGGTCCTAAAATCACCCTAAGTGACCTCATCCCCGCCTTTCAGAACCTACTTAAAGACTGCGAAG
CTGAAGTGCGAGCAGCTGCCGCCCACAAAGTCAAAGAACTTTGTGAGAACTTGCCCATTGAAGGTGGACAAGGGATGCAT
GGGACAGATATGTTAATATATGACATTGAATTAGTGTCTGATACAAATCAACATGTCAAATCAGCTCTAGCTTCTGTAAT
TATGGGATTGTCTACAATTTTGGGCAAAGAGAATACCATTGAACATCTTCTACCTCTTTTTTTAGCTCAGTTAAAGGATG
AGTGTCCTGAAGTTCGTTTGAATATCATCTCCAATTTGGATTGTGTAAATGAAGTGATTGGCATCCGTCAGCTCTCTCAG
TCTCTCCTTCCTGCCATAGTGGAGCTGGCTGAAGATGCCAAGTGGAGGGTCCGGCTGGCTATCATTGAGTATATGCCTCT
GCTGGCAGGCCAGCTGGGTGTGGAATTCTTTGATGAAAAGCTGAATTCTTTATGTATGGCCTGGCTTGTGGACCATGTAT
ATGCCATCCGTGAAGCCGCCACTAGCAACCTCATGAAACTAGTTCAGAAGTTTGGTACAGAGTGGGCCCAAAATACCATT
GTTCCCAAAGTGTTAGTAATGGCAAATGATCCTAATTACTTGCATAGAATGACCACTTTATTCTGCATTAACGCACTGTC
CGAAGCCTGTGGTCAAGAAATAACCACTAAGCAGATGCTGCCCATCGTCTTGAAAATGGCAGGAGACCAAGTAGCGAATG
TCCGTTTCAATGTGGCCAAATCTCTACAGAAAATTGGACCAATTCTAGATACTGAGGCTTTGCAGGAGGAAGTTAAGCCG
GTACTGCAGAAGTTAGGCCAAGATGAAGACATGGATGTCAAATACTTTGCACAGGAAGCAATAAGTGTGCTTGCGTTGGC
ATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 14 .82 RPM |
| SRP021940_embryo | 25 .85 RPM |
| SRP021940_cerebellum | 14 .33 RPM |
| SRP021940_testis | 130 .70 RPM |
| SRP021940_placental_villous | 21 .27 RPM |
| SRP021940_articular_cartilage | 4 .19 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_233 | 87.56 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000012108 retrocopies