Parental gene: | HDLBP, ENSECAG00000012829 |
| Aliases: | None |
| Description: | high density lipoprotein binding protein [Source:HGNC Symbol;Acc:4857] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 6:26574274..26610664(-) |
>ENSECAG00000012829
ATGAGCTCCGTTGCAGTTCTGACCCAAGAGAGCTTTGCTGAACACCGAAGTGGGCTGGTTCCGCAACAGATCAAAGTTGC
CACTTTAAATTCAGAAGAGGAGAGTGACCCTCCAACCTACAAGGATGCCTTTCCTCCACTCCCTGAGAAAGCAGCTTGTT
TGGAAAATGCCCAGGAACCTGCCGGCGCCTGGAGTAACAAGATCCGGCCCATCAAGGCTTCTGTCATCACTCAGGTATTC
CATGTACCCCTGGAGGAGAGAAAATACAAAGACATGAACCAGTTTGGAGAAGGTGAACAAGCAAAAATCTGCCTTGAGAT
CATGCAGAGAACTGGTGCTCACCTGGAGCTGTCTCTCGCCAAAGACCAGGGCCTCTCCATCATGGTCTCGGGGAAGCTGG
ACGCTGTCATGAAAGCCCGGAAGGACATTGTTGCTAGACTGCAGACTCAGGCCTCAGCAACTGTTGCCATTCCCAAAGAA
CACCATCGCTTCGTTATTGGCAAAAATGGAGAGAAACTGCAAGACTTGGAGTTAAAAACTGCAACCAAAATCCAGATCCC
CCGCCCAGATGACGCCAGCAATCAGATCAGGATCACCGGCACCAAAGAGGGCATCGAGAAAGCTCGCCATGAAGTCTTGC
TCATCTCTGCTGAGCAGGACAAACGTGCTGTAGAAAGGCTAGAAGTGGAGAAGGCTTTCCACCCCTTCATCGCTGGGCCT
TATAATCGGCTCGTTGGCGAGATCATGCAGGAGACGGGGACACGCATCAACATACCCCCACCCAGCGTCAACCGGACAGA
AATCGTCTTCACTGGGGAGAAGGAGCAGTTGGCTCAGGCTGTGGCTCGAATCAAGAAGATCTACGAGGAAAAGAAAAAGA
AGACCACGACCATCGCGGTGGAGGTGAAGAAATCCCAGCACAAGTATGTCATCGGGCCCAAGGGCAATTCCTTGCAGGAG
ATCCTGGAAAGAACTGGAGTTTCTGTGGAGATACCCCCCTCGGACAGCATCTCCGAGACTGTGATACTGCGAGGCGAGCC
TGAAAAGCTAGGACAGGCGTTGACTGAAGTCTATGCCAAGGCCAACAGTTTTACGGTCTCCTCCGTCTCTGCTCCTTCTT
GGCTTCACCGTTTCATCATTGGCAAGAAAGGGCAGAATCTGGCCAAAATCACTCAGCAGATGCCAAAGGTTCACATTGAG
TTCACAGAGGGTGAAGATAGGATCACCCTGGAAGGCCCCACAGAGGACGTGAATGTGGCCCAGGAGCAGATCGAAGCCAT
GGTCAAAGACTTGATTAACCGGATGGACTACGTGGAGATCAACATCGACCACAAGTTCCACAGACACCTTATTGGGAAGA
GCGGAGCCAACATAAACAGAATCAAAGACCAGTACAAGGTGTCTGTGCGCATCCCTCCTGACAGCGAGAAAAGCAACCTG
ATTCGCATCGAGGGGGACCCACAGGGGGTGCAACAGGCGAAGCGGGAGCTGCTGGAGCTCGCCTCTCGCATGGAAAATGA
GCGAACCAAGGATCTAATCATTGAGCAAAGATTTCATCGAACAATCATTGGGCAGAAGGGTGAACGGATCCGTGAAATTC
GTGACAAATTCCCAGAGGTCATCATCAACTTTCCAGACCCAGCACAAAAAAGTGATATTGTCCAACTCCGAGGGCCGAAG
AATGAGGTGGAAAAATGCACAAAATACATGCAGAAGATGGTGGCAGATCTGGTGGAAAATAGCTATTCAATTTCTGTTCC
AATCTTCAAACAGTTTCACAAGAACATCATTGGGAAAGGAGGCGCAAACATTAAAAAGATTCGGGAAGAAAGCAACACAA
AGATTGACCTTCCAGCAGAGAATAGCAATTCAGAAACCATTATCATCACAGGCAAGCGAGCCAACTGCGAGGCTGCCCGG
AGCCGCATTCTGTCCATCCAGAAAGACCTGGCCAACATAGCCGAGGTGGAGGTTTCAATCCCTGCCAAGCTGCATAACTC
TCTCATCGGCACGAAGGGCCGCCTGATCCGCTCCATCATGGAGGAGTGCGGTGGCGTCCACATTCACTTCCCTGTGGAAG
GCTCAGGAAGTGACACAGTTGTCATCAGGGGTCCTTCCTCGGATGTGGAGAAGGCCAAGAAACAGCTGCTGCACCTGGCT
GAGGAGAAGCAAACCAAGAGTTTCACCGTTGACATTCGCGCCAAGCCAGAATACCACAAGTTCCTCATTGGCAAAGGGGG
CGGCAAAATTCGCAAGGTGCGTGACAACACAGGAGCCCGCATCATATTCCCAGCGGCCGAGGACAAGGATCAGGAGCTGA
TCACCATCATAGGGAAGGAAGACGCCGTCAGGGAGGCCCAGAAGGAGCTGGAGGCCCTGATCCAGAACCTGGATAACGTG
GTTGAAGACAGCATGCTGGTGGACCCCAAGCACCACCGTCATTTCGTCATCCGGAGAGGCCAGGTCTTGCGGGAGATTGC
TGAAGAGTATGGTGGGGTGATGGTTAGCTTCCCACGCTCTGGCACTCAGAGTGACAAAGTCACCCTCAAGGGTGCCAAGG
ACTGCGTGGAGGCGGCCAAGAAGCGCATTCAGGAGATCATCGAGGACCTGGAAGCCCAGGTGACCATTGAATGTGCCATA
CCCCAGAAATTTCACCGCTCTGTCATGGGCCCCAAAGGTTCCAGGATCCAGCAGATTACTCGGGACTATAACGTTCAAAT
TAAATTCCCAGACAGAGAGGAGAACCCAGTTCATAGTGTGGAGCCGGCTGTCCAGGAGAACGGTGACGACGCTGGGGAGG
GGAGGGATGCTAAAGAGGCCGACCCTGGCTCTCCCAGGAGGTGCGACATCATCACCATCTCTGGCCGAAAGGAAAAATGT
GAGGCTGCCAAGGAAGCCCTCGAGGCGCTGGTTCCCGTCACCATTGAAGTGGAGGTGCCCTTTGACCTTCACCGGTACAT
CATCGGGCAGAGGGGAAGTGGGATCCGCAAGATGATGGACGAGTTTGAGGTAAACATACACGTGCCAGCACCTGAACTGC
AGTCTGACATCATCGCCATCACGGGCCTCGCTGCCAATTTGGACCGGGCCAAGGCTGGGCTACTGGAGCGTGTGAAGGAG
CTGCAGGCGGAACAGGAGGACCGGGCTTTAAGGAGTTTTAAGCTGAGCGTCACTGTAGATCCCAAATACCATCCCAAAAT
TATTGGGAGAAAAGGGGCAGTGATTACCCAAATCCGCTTGGAGCATGATGTGAACATCCAGTTTCCTGATAAGGACGATG
GGAACCAGCCCCAGGACCAAATTACCATCACAGGGTACGAAAAGAATACAGAAGCAGCCCGGGACGCAATCCTGAAAATC
GTGGGTGAGCTTGAACAGATGGTTTCTGAGGACGTGCCTCTGGACCACCGTGTGCACGCCCGCATCATTGGTGCCCGTGG
CAAAGCCATCCGTAAGGTCATGGACGAATTCAAGGTGGACATTCGCTTCCCACAGAGCGGAGCCCCAGACCCCAACTGCG
TCACCGTGACGGGGCTCCCAGAGAACGTGGAGGAAGCCATCGACCACATCCTCAACCTGGAGGAGGAATACCTGGCTGAC
GTGGTGGACAGCGAGGCGCTGCAGGTGTACATGAAGCCCCCAGCCCATGAGGAGTCCAAGGCGCCATCCAAGGGCTTTGT
GGTGCGGGACGCTCCGTGGACCGCCAACAGCAGCGAGAAGGCTCCTGATATGAGCAGCTCTGAGGAATTTCCCAGCTTTG
GGGCTCAGGTGGCCCCCAAGACCCTCCCTTGGGGCCCCAAACGATAA
ATGAGCTCCGTTGCAGTTCTGACCCAAGAGAGCTTTGCTGAACACCGAAGTGGGCTGGTTCCGCAACAGATCAAAGTTGC
CACTTTAAATTCAGAAGAGGAGAGTGACCCTCCAACCTACAAGGATGCCTTTCCTCCACTCCCTGAGAAAGCAGCTTGTT
TGGAAAATGCCCAGGAACCTGCCGGCGCCTGGAGTAACAAGATCCGGCCCATCAAGGCTTCTGTCATCACTCAGGTATTC
CATGTACCCCTGGAGGAGAGAAAATACAAAGACATGAACCAGTTTGGAGAAGGTGAACAAGCAAAAATCTGCCTTGAGAT
CATGCAGAGAACTGGTGCTCACCTGGAGCTGTCTCTCGCCAAAGACCAGGGCCTCTCCATCATGGTCTCGGGGAAGCTGG
ACGCTGTCATGAAAGCCCGGAAGGACATTGTTGCTAGACTGCAGACTCAGGCCTCAGCAACTGTTGCCATTCCCAAAGAA
CACCATCGCTTCGTTATTGGCAAAAATGGAGAGAAACTGCAAGACTTGGAGTTAAAAACTGCAACCAAAATCCAGATCCC
CCGCCCAGATGACGCCAGCAATCAGATCAGGATCACCGGCACCAAAGAGGGCATCGAGAAAGCTCGCCATGAAGTCTTGC
TCATCTCTGCTGAGCAGGACAAACGTGCTGTAGAAAGGCTAGAAGTGGAGAAGGCTTTCCACCCCTTCATCGCTGGGCCT
TATAATCGGCTCGTTGGCGAGATCATGCAGGAGACGGGGACACGCATCAACATACCCCCACCCAGCGTCAACCGGACAGA
AATCGTCTTCACTGGGGAGAAGGAGCAGTTGGCTCAGGCTGTGGCTCGAATCAAGAAGATCTACGAGGAAAAGAAAAAGA
AGACCACGACCATCGCGGTGGAGGTGAAGAAATCCCAGCACAAGTATGTCATCGGGCCCAAGGGCAATTCCTTGCAGGAG
ATCCTGGAAAGAACTGGAGTTTCTGTGGAGATACCCCCCTCGGACAGCATCTCCGAGACTGTGATACTGCGAGGCGAGCC
TGAAAAGCTAGGACAGGCGTTGACTGAAGTCTATGCCAAGGCCAACAGTTTTACGGTCTCCTCCGTCTCTGCTCCTTCTT
GGCTTCACCGTTTCATCATTGGCAAGAAAGGGCAGAATCTGGCCAAAATCACTCAGCAGATGCCAAAGGTTCACATTGAG
TTCACAGAGGGTGAAGATAGGATCACCCTGGAAGGCCCCACAGAGGACGTGAATGTGGCCCAGGAGCAGATCGAAGCCAT
GGTCAAAGACTTGATTAACCGGATGGACTACGTGGAGATCAACATCGACCACAAGTTCCACAGACACCTTATTGGGAAGA
GCGGAGCCAACATAAACAGAATCAAAGACCAGTACAAGGTGTCTGTGCGCATCCCTCCTGACAGCGAGAAAAGCAACCTG
ATTCGCATCGAGGGGGACCCACAGGGGGTGCAACAGGCGAAGCGGGAGCTGCTGGAGCTCGCCTCTCGCATGGAAAATGA
GCGAACCAAGGATCTAATCATTGAGCAAAGATTTCATCGAACAATCATTGGGCAGAAGGGTGAACGGATCCGTGAAATTC
GTGACAAATTCCCAGAGGTCATCATCAACTTTCCAGACCCAGCACAAAAAAGTGATATTGTCCAACTCCGAGGGCCGAAG
AATGAGGTGGAAAAATGCACAAAATACATGCAGAAGATGGTGGCAGATCTGGTGGAAAATAGCTATTCAATTTCTGTTCC
AATCTTCAAACAGTTTCACAAGAACATCATTGGGAAAGGAGGCGCAAACATTAAAAAGATTCGGGAAGAAAGCAACACAA
AGATTGACCTTCCAGCAGAGAATAGCAATTCAGAAACCATTATCATCACAGGCAAGCGAGCCAACTGCGAGGCTGCCCGG
AGCCGCATTCTGTCCATCCAGAAAGACCTGGCCAACATAGCCGAGGTGGAGGTTTCAATCCCTGCCAAGCTGCATAACTC
TCTCATCGGCACGAAGGGCCGCCTGATCCGCTCCATCATGGAGGAGTGCGGTGGCGTCCACATTCACTTCCCTGTGGAAG
GCTCAGGAAGTGACACAGTTGTCATCAGGGGTCCTTCCTCGGATGTGGAGAAGGCCAAGAAACAGCTGCTGCACCTGGCT
GAGGAGAAGCAAACCAAGAGTTTCACCGTTGACATTCGCGCCAAGCCAGAATACCACAAGTTCCTCATTGGCAAAGGGGG
CGGCAAAATTCGCAAGGTGCGTGACAACACAGGAGCCCGCATCATATTCCCAGCGGCCGAGGACAAGGATCAGGAGCTGA
TCACCATCATAGGGAAGGAAGACGCCGTCAGGGAGGCCCAGAAGGAGCTGGAGGCCCTGATCCAGAACCTGGATAACGTG
GTTGAAGACAGCATGCTGGTGGACCCCAAGCACCACCGTCATTTCGTCATCCGGAGAGGCCAGGTCTTGCGGGAGATTGC
TGAAGAGTATGGTGGGGTGATGGTTAGCTTCCCACGCTCTGGCACTCAGAGTGACAAAGTCACCCTCAAGGGTGCCAAGG
ACTGCGTGGAGGCGGCCAAGAAGCGCATTCAGGAGATCATCGAGGACCTGGAAGCCCAGGTGACCATTGAATGTGCCATA
CCCCAGAAATTTCACCGCTCTGTCATGGGCCCCAAAGGTTCCAGGATCCAGCAGATTACTCGGGACTATAACGTTCAAAT
TAAATTCCCAGACAGAGAGGAGAACCCAGTTCATAGTGTGGAGCCGGCTGTCCAGGAGAACGGTGACGACGCTGGGGAGG
GGAGGGATGCTAAAGAGGCCGACCCTGGCTCTCCCAGGAGGTGCGACATCATCACCATCTCTGGCCGAAAGGAAAAATGT
GAGGCTGCCAAGGAAGCCCTCGAGGCGCTGGTTCCCGTCACCATTGAAGTGGAGGTGCCCTTTGACCTTCACCGGTACAT
CATCGGGCAGAGGGGAAGTGGGATCCGCAAGATGATGGACGAGTTTGAGGTAAACATACACGTGCCAGCACCTGAACTGC
AGTCTGACATCATCGCCATCACGGGCCTCGCTGCCAATTTGGACCGGGCCAAGGCTGGGCTACTGGAGCGTGTGAAGGAG
CTGCAGGCGGAACAGGAGGACCGGGCTTTAAGGAGTTTTAAGCTGAGCGTCACTGTAGATCCCAAATACCATCCCAAAAT
TATTGGGAGAAAAGGGGCAGTGATTACCCAAATCCGCTTGGAGCATGATGTGAACATCCAGTTTCCTGATAAGGACGATG
GGAACCAGCCCCAGGACCAAATTACCATCACAGGGTACGAAAAGAATACAGAAGCAGCCCGGGACGCAATCCTGAAAATC
GTGGGTGAGCTTGAACAGATGGTTTCTGAGGACGTGCCTCTGGACCACCGTGTGCACGCCCGCATCATTGGTGCCCGTGG
CAAAGCCATCCGTAAGGTCATGGACGAATTCAAGGTGGACATTCGCTTCCCACAGAGCGGAGCCCCAGACCCCAACTGCG
TCACCGTGACGGGGCTCCCAGAGAACGTGGAGGAAGCCATCGACCACATCCTCAACCTGGAGGAGGAATACCTGGCTGAC
GTGGTGGACAGCGAGGCGCTGCAGGTGTACATGAAGCCCCCAGCCCATGAGGAGTCCAAGGCGCCATCCAAGGGCTTTGT
GGTGCGGGACGCTCCGTGGACCGCCAACAGCAGCGAGAAGGCTCCTGATATGAGCAGCTCTGAGGAATTTCCCAGCTTTG
GGGCTCAGGTGGCCCCCAAGACCCTCCCTTGGGGCCCCAAACGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 570 .26 RPM |
| SRP021940_embryo | 443 .66 RPM |
| SRP021940_cerebellum | 184 .52 RPM |
| SRP021940_testis | 880 .24 RPM |
| SRP021940_placental_villous | 300 .89 RPM |
| SRP021940_articular_cartilage | 596 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000014826 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000034088 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013818 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013351 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_1042 | 58.53 | 88.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000012829 retrocopies