Parental gene: | CRABP1, ENSECAG00000015978 |
| Aliases: | None |
| Description: | cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:2338] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 1:115967646..115974183(+) |
>ENSECAG00000015978
ATGCCCAACTTCGCCGGCACCTGGAAGATGCGCAGCAGCGAGAATTTTGACGAGCTGCTCAAGGCGCTGGGTGTGAACGC
CATGCTGAGGAAAGTGGCCGTGGCCGCTGCGTCCAAGCCGCACGTGGAGATCCGCCAGGATGGAGATCAGTTCTACATCA
AGACATCCACCACGGTGCGCACCACCGAGATCAACTTCAAGGTCGGAGAAGGCTTTGAGGAGGAGACAGTGGATGGACGC
AAGTGCAGGAGTTTAGCCACTTGGGAGAATGAGAACAAGATCCACTGCACACAAACTCTCCTTGAAGGGGATGGCCCCAA
AACCTACTGGACCCGCGAGCTGGCCAACGACGAGCTCATCCTGACATTCGGCGCGGATGACGTGGTCTGCACGAGGATTT
ATGTTCGGGAGTGA
ATGCCCAACTTCGCCGGCACCTGGAAGATGCGCAGCAGCGAGAATTTTGACGAGCTGCTCAAGGCGCTGGGTGTGAACGC
CATGCTGAGGAAAGTGGCCGTGGCCGCTGCGTCCAAGCCGCACGTGGAGATCCGCCAGGATGGAGATCAGTTCTACATCA
AGACATCCACCACGGTGCGCACCACCGAGATCAACTTCAAGGTCGGAGAAGGCTTTGAGGAGGAGACAGTGGATGGACGC
AAGTGCAGGAGTTTAGCCACTTGGGAGAATGAGAACAAGATCCACTGCACACAAACTCTCCTTGAAGGGGATGGCCCCAA
AACCTACTGGACCCGCGAGCTGGCCAACGACGAGCTCATCCTGACATTCGGCGCGGATGACGTGGTCTGCACGAGGATTT
ATGTTCGGGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 47 .55 RPM |
| SRP021940_embryo | 165 .10 RPM |
| SRP021940_cerebellum | 4 .31 RPM |
| SRP021940_testis | 50 .58 RPM |
| SRP021940_placental_villous | 107 .91 RPM |
| SRP021940_articular_cartilage | 8 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000008270 | other_paralog | 2 retrogenes | |
| Equus caballus | ENSECAG00000023552 | other_paralog | 1 retrogene | |
| Equus caballus | ENSECAG00000024852 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_416 | 81.75 | 99.27 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000015978 retrocopies